Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00574 ATGTTGGAGGGTCAACAGAATCTGCTCGAGATGACCCAAAACACCTCGGAAAGCGAAATGGCTAAGATCATCAGAGACGAAGAATATGAAAGCAAATCTGGCAGCGAAAACCATGGAGGTGCCTCTGGCGACGATCAAGATCCCAACCAGCGTCCCCGTAAGAAGCGTTACCATCGCCACACCCAGCATCAAATCCAAGAAATGGAAGCTTTCTTCAAAGAGTGTCCTCACCCAGATGACAAACAAAGGAAGGAGCTGGGCCGTGAATTAGGGCTAGAGCCTTTGCAAATCAAATTTTGGTTCCAAAATAAGCGTACCCAAATGAAGACTCAGCATGAGCGCCATGAGAACACACAGCTGAGATCCGAGAATGACAAACTCCGAGCAGAGAACATAAGGTACAAAGAAGTGCTCAGTAACACTTCATGTCCCAATTGTGGAGGCCCAACTGCTATTGGCGAGATGTCGTTCGACGAGCATAACTTAAGGATCGAGAATGCTCGATTAAGAGAAGAGATCGATAGGATTTCGGCAATAGCTGCAAAGTATGTTGGAAAGCCTATAGTTTCGTATCCTCTTCTTTCTCCACAGATTCCTCCGCGTTCACTCGACCTTGGGGTTGGGAATTTTGGGCTACAGCCAGGCATGGGAGGGGAGATGTATGGAGCCGGCGATCTCCTCAGGTCGGTCTCCGGGCCTACTGAGGCAGATAAGCAAATGATCATCGAGCTTGCAGTTGGAGCAATGGAGGAGCTGATCAGAATGGCGCAACTCGGGGAACCCTTATGGCTGCCAGGCCTTGACCAGAGTTCTGAGATTCTATGCGAAGAGGAATACATGCGAGCATTCCCTAGGGGAATCGGGCCAAAACCTTTCGGGTTGAAATCCGAAGCTTCTCGTGAAAGCGCAGTTGTTATTATGAATCACATTAACCTTGTTGAGATCCTTATGGATGTGAATCAGTGGTCAAGTGTGTTTTCTAGCATCATTTCAAGAGCCATGACTCTAGAAGTCTTATCAACAGGCGTAGCAGGAAATCACAATGGAGCCCTACAAGTGATGACAGCAGAATTCCAAGTCCCTTCACCTCTTGTTCCGACTCGTGAGAGTTTATTTGTAAGGTACTGTAAACAGCATCCTGATGGAACTTGGGCAGTGGTTGATGTTTCCTTGGACCATTTACGTCCTAGTCCGATATTGAGATGTCGAAGAAGGCCATCAGGCTGTTTAATCCAAGAAATGCCAAATGGTTACTCGAAGGTTATGTGGGTCGAACATGTAGAAGTGGATGACAGAGCAGTTCACGATATATACAGACCACTGGTTAACTCCTGCCTTGCATTTGGCGCGAAGCGATGGGTCGAAACCTTAGATCGACAGTGTGAACGCCTTGCAAGTGTTATGGCCAGTAACATTCCTGTGGGAGATGTTGGTGTAATAACAAGTCAAGAAGGGAAGAGAAGTATGTTGAAGTTGGCTGAGAGGATGGTGATAAGTTTTTGTGCTGGTGTGAGTGCCTCTACCACTCACACATGGACTACATTATCTGGAAGTGGCGCTGAAGATGTGAGGGTCATGACCAGAAAGAGTATAGATGATCCAGGCAGGCCTTCTGGTATTGTGCTAAGTGCAGCCACTTCCTTCTGGCTTCCAGTCCCACCGAAAAGAGTTTTCGATTTTGTTCGAGATGAGAACTCTCGAAATGAGTGGGATATACTTTCAAATGGAGGTCTTGCTCAAGAAATGGCACACATCGCTAATGGCCGTGATCCTGGCAACTGTGTTTCTCTACTGCGAGTAAATAGTGCAAATTCCAGCCAAAGCAACATGCTGATATTACAAGAGAGTTGCATCGACACAACAGGCTCTTTTGTAATTTATGCTCCTGTTGATATAGCTTCAATGAATGTGGTTATAAGCGGGGGAGACCCAGACTATGTAGCCCTCCTTCCCTCAGGTTTTGCTATACTCCCTGATGGGCCAACAGTGCATGGAGGTGGAATTGCTGAGGTTGGGTCTGGTGGATCTCTCCTTACTGTTGCATTTCAGATCTTGGTTGATTCGGTTCCAACAGCGAAACTCTCTCTTGGATCGGTGGCGACTGTTAACAGCCTCATCGCTTGCACTGTTGATAGGATCAAGGCCGCGGTTTCATGCGATAACGCATGA 2169 0.4721 MLEGQQNLLEMTQNTSESEMAKIIRDEEYESKSGSENHGGASGDDQDPNQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELGRELGLEPLQIKFWFQNKRTQMKTQHERHENTQLRSENDKLRAENIRYKEVLSNTSCPNCGGPTAIGEMSFDEHNLRIENARLREEIDRISAIAAKYVGKPIVSYPLLSPQIPPRSLDLGVGNFGLQPGMGGEMYGAGDLLRSVSGPTEADKQMIIELAVGAMEELIRMAQLGEPLWLPGLDQSSEILCEEEYMRAFPRGIGPKPFGLKSEASRESAVVIMNHINLVEILMDVNQWSSVFSSIISRAMTLEVLSTGVAGNHNGALQVMTAEFQVPSPLVPTRESLFVRYCKQHPDGTWAVVDVSLDHLRPSPILRCRRRPSGCLIQEMPNGYSKVMWVEHVEVDDRAVHDIYRPLVNSCLAFGAKRWVETLDRQCERLASVMASNIPVGDVGVITSQEGKRSMLKLAERMVISFCAGVSASTTHTWTTLSGSGAEDVRVMTRKSIDDPGRPSGIVLSAATSFWLPVPPKRVFDFVRDENSRNEWDILSNGGLAQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLILQESCIDTTGSFVIYAPVDIASMNVVISGGDPDYVALLPSGFAILPDGPTVHGGGIAEVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVDRIKAAVSCDNA* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00574 722 CDD homeodomain 53 112 IPR001356 GO:0003677
Eupl06g00574 722 Pfam Homeodomain 54 109 IPR001356 GO:0003677
Eupl06g00574 722 FunFam Homeobox-leucine zipper protein HDG1 42 127 - -
Eupl06g00574 722 SUPERFAMILY Homeodomain-like 39 111 IPR009057 -
Eupl06g00574 722 SMART START_1 243 463 IPR002913 GO:0008289
Eupl06g00574 722 ProSiteProfiles 'Homeobox' domain profile. 51 111 IPR001356 GO:0003677
Eupl06g00574 722 MobiDBLite consensus disorder prediction 1 19 - -
Eupl06g00574 722 SUPERFAMILY Bet v1-like 234 465 - -
Eupl06g00574 722 SMART HOX_1 52 115 IPR001356 GO:0003677
Eupl06g00574 722 Gene3D - 300 466 IPR023393 -
Eupl06g00574 722 CDD START_ArGLABRA2_like 238 462 - -
Eupl06g00574 722 Coils Coil 110 137 - -
Eupl06g00574 722 SUPERFAMILY Bet v1-like 483 714 - -
Eupl06g00574 722 Gene3D - 41 127 - -
Eupl06g00574 722 MobiDBLite consensus disorder prediction 20 34 - -
Eupl06g00574 722 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 50 717 IPR042160 -
Eupl06g00574 722 FunFam Homeobox-leucine zipper protein GLABRA 2 243 462 - -
Eupl06g00574 722 ProSiteProfiles START domain profile. 234 466 IPR002913 GO:0008289
Eupl06g00574 722 MobiDBLite consensus disorder prediction 1 62 - -
Eupl06g00574 722 Pfam START domain 244 463 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00574 Eupl-Chr6 8269726 8277080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00574 6 720 Homeobox Transcription Factor Family AT4G04890 76.334 0.0 1128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl06g00574 START 5.2e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00574 K09338 - nnu:104604866 1273.46