Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00561 ATGGCTCAAAATAATAGTAATATCAATCCCACGACCTCGCTGAATTTTGGTGTGGTTTTTGATTTAAGTACGTGGGTAGGGAGAATGAGTAATAGCTGCATTTTCATGGCCCTCTCTGATTTTTACGCTGTAAATACTAATTACAGCACAAGGCTGATTCCCCACGTAAGGGATTCCAAGGAAGACGTCGTCACTGCAGCATCTGCAGGGAAAAAAATGGTTAAAAACTTTACTGGCTTAGGGAACTTGGTGGCCTACCAGACGGGTGTTGCACTTCTGGAAGCCATCTCAACGACAAAATTTGAAGGGCTATGTGGGGAATTTCATCTAATTGATGGGCAGTTGAAATCATCAATCTTCCAGATTGTCAACGTGATTGGAAAGGGAGAGAGAGAGATTGGATTTTGGACGCCAACTTATGGGATTTCCCGAGAACTTGAATCAACCAGCAAGAAAATTTACTCAACCTCCAAGGATGCCCTTGGACCAATCATCTGGCCTGGAGAATTAAAGACTATACCAAAGGGTTGGTTAATGACGGGGAAAATTTTAAGGGTCGGAGTTCCGGTCAAAGATTCAGGGTTTTCGGAATTTGTGAAAGTGCAAAAAGATCCTCTCACTAACATGACTGCCGTCTCTGGTTTCTGTCTTGATGTGTTCAGTGCTGTAATGAAGCAGGCTCTACCTTTCGTCAGTTATGAGTACGTTCCCTTCGAGAATGAGAAAGGTCAGAGTGCAGGGAATTACGACGATTTGATCTACCAAGTGTACTTACGGGAATTCGATGCGGTGGTAGGAGATACAACGATCCTAGTTAACAGATCATTTTATGTAGATTTTACGGCGGCCTATACAGATTTGGGGGTGTCGATGATAATGCCTATCACAAAGGATGAGAGGAAGAAAGGATGGATTTTCTTGAAGCCTTTGACAATGGATCTTTGGTTGACGACTGGAGCAGCATTCGTATTCACAGGCTTCGTTGTGTGGGTTCTCGAACACCGTATAAATGAAGAGTTCAGGGGATCTCCCACACAACAACTCGGCACCATCTTTTGGTTCTCATTCTCCACGTCCGTCTTTGCACACAGGGAGAGGGTGGCAAGTAACTTGTCAAGGTTCGTGTTGATCATATGGATGTTGGCGGTGTTCGTGCTGACATCCAGCTACACGGCAAGCTTAAGTTCAATACTTACAGTTCAGCAGCTTACCCGTACCAACATCAATGATCTCAGAAAGAATGGAGACTTCGTGGGATACCAGAAGGGATCCTTTGTGTTGGATCTACTCAAGCGATTGTACTTCGACGAGTCCAAGCTAAAGGCGCTTAGCTCCCCAGAGGAGTACGACGTCGCCCTATCTAAAGGAAGTGGAAACGGAGGAGTTTCTGCCATTGTTGACGAAATCCCTTACATCAAGCTCTTCACTGCTATGTATTGCGCTAAATACACCTATATCGGTCCTATACAGTACACCGATGGATTTGGCTTTGTCTTTCCAAAAGGTTCCCATCTCGTACCGGAGGTTTCAGGAGCAATCTCAAAACTAATAAAGCAAGGCAAGATTGAGGAAATCAACAAGGCATGGTTTTCCAATCAAACTACATGTGAAGACCAAGCCATCACAGCTCCTTCAAGCATTCTAAGTCTGGATAGCTTCCGAGGTCTCTTCCTCATCACCATAATAGCTTCGACATTCGCACTCTTGGTATTCTTAGGTTTCTTCTTTCTCGAGCACGTACATATTTTAACAGCCGTTGATCCTGAAAACAACTCCATCTGGCAAAGACTCGTCAAGGTCTTCAAACACTTCTACCAAGAATCGGCAATCAATCTCTCGAGCGATTCTAACCACAACGTCATGAACATTCAGCTGACAGAATCTAGAACCTCTCTTTCAGAGTCTGAGGGTAGTACTCGATCTCCAAATACACCACTCACTCAAGAAATATCCCAAGATGATCTAGATGAAGAAGGCATGTACTTCTGTTCGTGA 1995 0.4421 MAQNNSNINPTTSLNFGVVFDLSTWVGRMSNSCIFMALSDFYAVNTNYSTRLIPHVRDSKEDVVTAASAGKKMVKNFTGLGNLVAYQTGVALLEAISTTKFEGLCGEFHLIDGQLKSSIFQIVNVIGKGEREIGFWTPTYGISRELESTSKKIYSTSKDALGPIIWPGELKTIPKGWLMTGKILRVGVPVKDSGFSEFVKVQKDPLTNMTAVSGFCLDVFSAVMKQALPFVSYEYVPFENEKGQSAGNYDDLIYQVYLREFDAVVGDTTILVNRSFYVDFTAAYTDLGVSMIMPITKDERKKGWIFLKPLTMDLWLTTGAAFVFTGFVVWVLEHRINEEFRGSPTQQLGTIFWFSFSTSVFAHRERVASNLSRFVLIIWMLAVFVLTSSYTASLSSILTVQQLTRTNINDLRKNGDFVGYQKGSFVLDLLKRLYFDESKLKALSSPEEYDVALSKGSGNGGVSAIVDEIPYIKLFTAMYCAKYTYIGPIQYTDGFGFVFPKGSHLVPEVSGAISKLIKQGKIEEINKAWFSNQTTCEDQAITAPSSILSLDSFRGLFLITIIASTFALLVFLGFFFLEHVHILTAVDPENNSIWQRLVKVFKHFYQESAINLSSDSNHNVMNIQLTESRTSLSESEGSTRSPNTPLTQEISQDDLDEEGMYFCS* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00561 664 FunFam Glutamate receptor 183 303 - -
Eupl06g00561 664 SUPERFAMILY Periplasmic binding protein-like II 177 532 - -
Eupl06g00561 664 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 80 602 IPR015683 -
Eupl06g00561 664 CDD GluR_Plant 182 530 - -
Eupl06g00561 664 SMART GluR_14 183 532 IPR001320 GO:0015276|GO:0016020
Eupl06g00561 664 FunFam Glutamate receptor 85 182 - -
Eupl06g00561 664 MobiDBLite consensus disorder prediction 628 650 - -
Eupl06g00561 664 Gene3D - 477 538 - -
Eupl06g00561 664 Gene3D - 304 436 - -
Eupl06g00561 664 Pfam Bacterial extracellular solute-binding proteins, family 3 211 531 IPR001638 -
Eupl06g00561 664 Pfam Ligand-gated ion channel 532 563 IPR001320 GO:0015276|GO:0016020
Eupl06g00561 664 MobiDBLite consensus disorder prediction 628 651 - -
Eupl06g00561 664 FunFam Glutamate receptor 303 431 - -
Eupl06g00561 664 Gene3D - 182 303 - -
Eupl06g00561 664 SUPERFAMILY Periplasmic binding protein-like I 81 177 IPR028082 -
Eupl06g00561 664 Gene3D - 75 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00561 Eupl-Chr6 8135725 8141880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00561 9 75 Ion Channels AT2G29100 47.761 9.01e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00561 K05387 - msin:131256816 647.891