Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00556 ATGATCTATTCGGTAAAGCAATCCGCTGCGGCTCTCACCGTCTCCGATCTCCTACGGAGATCGTCCCCGGCTCCAAAACCGCGACTGTCGTTGCTTCCTTCTTTGTCTGCAGCAAAAGGTCGTAACTTAGTTCTCTCTAACTCTGTTATCTCGGCTCTGAAGCCTCTGTGTATTTCCTCTGTTGAAGGTCTTGTATCCTCTGAGGGGCCAAGACCTCGAAAGCCCGTAATCGAGTGCAAGGCCTACGAAGCTGATCAATCGCAGCCGATTGATGCCAACATCGAACTCTCCGATCAACAGGCACGATCGGCCGCAGCTCAAAAGCTGAAAATCAGCATCTACTTCGCAACTTGGTGGGCTTTAAACGTCGTCTTCAACATCTACAACAAGAAGGTCCTTAATGCCTTTCCGTACCCATGGCTCACTTCCACCTTGTCGCTCGCAACTGGATCGCTTATGATGTTGATTTCGTGGGCTACAAGAATCGCCGAGGCTCCGAAAACTGATGCGGAGTTCTGGAAATCCCTATTTCCGGTGGCTGTTGCGCATACAATAGGGCATGTTGCGGCGACAGTGAGTATGTCAAAGGTTGCTGTTTCATTCACTCACATCATCAAAAGTGGTGAGCCTGCGTTCAGCGTCTTGGTTTCAAGATTTCTACTGGGTGAAACGTTTCCGGTGCCGGTCTACCTTTCTCTTCTTCCGATTATCGGAGGTTGTGCACTCGCTGCTGTCACTGAGCTCAACTTCAACATGACTGGGTTTATGGGAGCTATGATATCAAATCTGGCGTTTGTATTTCGTAACATATTCTCAAAGAAAGGGATGAAGGGCAAGTCGGTTGGTGGAATGAACTACTACGCTTGTCTGTCTATGTTGTCACTCGTGATTCTCACGCCCTTCGCAATTGCTGTGGAGGGTCCCCAGATGTGGGCAGTTGGCTGGCAAAAAGCGATCTCCCAGATTGGACCTAATTTCATATGGTGGGTGGCAGCCCAGAGTGTGTTCTATCACCTCTACAATCAGGTCTCGTATATGTCCTTGGACCAGATCTCCCCCTTAACGTTTAGCATTGGAAACACCATGAAGAGAATATCAGTCATTGTCTCGTCCATCATCATCTTCCACACGCCTGTCCAGCCCGTCAATGCCCTTGGAGCTGCCATTGCAATTCTTGGAACCTTCCTCTATTCCCAGGTAAACTCTTGCTCTCATTATGAATTGAATATGACTGCCAGAATTTTTCCATCGCTCTATTGTCTCAACATGACTAGAATGCCCTTGACTTTTCTTGGAACCAAAATGTCTTAG 1311 0.4821 MIYSVKQSAAALTVSDLLRRSSPAPKPRLSLLPSLSAAKGRNLVLSNSVISALKPLCISSVEGLVSSEGPRPRKPVIECKAYEADQSQPIDANIELSDQQARSAAAQKLKISIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLATGSLMMLISWATRIAEAPKTDAEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMLSLVILTPFAIAVEGPQMWAVGWQKAISQIGPNFIWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQVNSCSHYELNMTARIFPSLYCLNMTRMPLTFLGTKMS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00556 436 PANTHER SOLUTE CARRIER FAMILY 35 111 401 - -
Eupl06g00556 436 SUPERFAMILY Multidrug resistance efflux transporter EmrE 301 398 - -
Eupl06g00556 436 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 109 402 IPR004696 GO:0016020|GO:0022857|GO:0055085
Eupl06g00556 436 Pfam Triose-phosphate Transporter family 109 398 IPR004853 -
Eupl06g00556 436 SUPERFAMILY Multidrug resistance efflux transporter EmrE 153 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00556 Eupl-Chr6 8003963 8008891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00556 14 405 Antiporters AT1G61800 77.806 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00556 K15283 K05350 nnu:104604860 637.106