Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00533 ATGAGTTGTTTTGAGTGTTTTACGTCGGAGAAGTCATTGAAGAAGAGCAGAAAACATAAAAAACGGACCGCGTTGTCCAATTTCATTGAGAATATGTCCATCAAATCTGAAAACAACAAGCAGAAGAACATCGCTGAAGAGATAATGAAAATGGCAAATGGGAATATTGCCGCTCAAATCTTCACATTCCGCGAGTTAGCAGTTGCAACTAAGAACTTCAACTCAGAATGTCTGATTGGTGAAGGTGGCTTTGGAAGGGTGTACAAAGGACTAATAGGGACCACAAAACAAGTTGTGGCCGTTAAGCAACTCGACAGAAATGGGTTGCAAGGAAATAGAGAGTTCCTTGTCGAAGTTTTGATGCTGAGTACTCTTCATCACCCAAACCTTGTTAATCTAATTGGTTATTGCGCCGATGGGGATCAAAGGATTTTAGTGTACGAGTACATGCCATTGGGGTCTTTGGAGGATCACCTTCTTGATATATCTCCAGATAGCATGCCTTTGGATTGGAGTACCAGGATGAAAATAGCTGAAGGTGCAGCCAAAGGACTCGAATACTTGCACGACAAGGCCAACCCTCCAGTGATTTATCGAGATTTCAAAGCATCTAATATATTATTGAATGAGGATTTCAACCCAAAGCTGTCTGATTTTGGGCTTGCCAGGCTGGGTCCAACTGGGGATAAGAGTCATGTGTCTACAAGGGTGATGGGGACCTATGGTTACTGTGCACCTGAGTATGCAATGACAGGTCAATTGACAACAATGTCCGACGTTTACAGTTTCGGAGTTGTGTTTCTGGAGATAATCACAGGAAGGAGATCTATCGACTACGCGAGACCAGCTGATGAGCAGAATCTTGTTGCTTGGGCACAACCATTGTTTAAAGACAGAAGGAAGTTCACACTAATGGCTGACCCAGTGCTTGAAGGGAAGTACCCCATGAAGGGACTCTACCAAGCTCTTGCGGTCGCAGCAATGTGTCTCCAAGAAGAAGCCAATACTCGACCCTTGATCTGTGATGTCGTAACTGCTCTTGAGTATCTAGCAGTTCCGAAAATTGATGAGGTGAGCACAAAAGAGACTCTGAACTCGCCTTCTCTTGATAAAAATTGCGGTGTTGAGAGTAATGTTAGAACGCATGGCGTTGGAGATCAGGAACAAGATAGTGTGGTGGAATCCATGAATTAA 1194 0.4372 MSCFECFTSEKSLKKSRKHKKRTALSNFIENMSIKSENNKQKNIAEEIMKMANGNIAAQIFTFRELAVATKNFNSECLIGEGGFGRVYKGLIGTTKQVVAVKQLDRNGLQGNREFLVEVLMLSTLHHPNLVNLIGYCADGDQRILVYEYMPLGSLEDHLLDISPDSMPLDWSTRMKIAEGAAKGLEYLHDKANPPVIYRDFKASNILLNEDFNPKLSDFGLARLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTTMSDVYSFGVVFLEIITGRRSIDYARPADEQNLVAWAQPLFKDRRKFTLMADPVLEGKYPMKGLYQALAVAAMCLQEEANTRPLICDVVTALEYLAVPKIDEVSTKETLNSPSLDKNCGVESNVRTHGVGDQEQDSVVESMN* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00533 397 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Eupl06g00533 397 FunFam probable serine/threonine-protein kinase RLCKVII 45 149 - -
Eupl06g00533 397 PANTHER OS07G0668900 PROTEIN 3 359 - -
Eupl06g00533 397 Gene3D Phosphorylase Kinase; domain 1 29 149 - -
Eupl06g00533 397 ProSiteProfiles Protein kinase domain profile. 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00533 397 MobiDBLite consensus disorder prediction 382 397 - -
Eupl06g00533 397 Pfam Protein kinase domain 76 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00533 397 FunFam Serine/threonine-protein kinase PBS1 150 365 - -
Eupl06g00533 397 MobiDBLite consensus disorder prediction 369 397 - -
Eupl06g00533 397 CDD STKc_IRAK 79 348 - -
Eupl06g00533 397 SUPERFAMILY Protein kinase-like (PK-like) 59 363 IPR011009 -
Eupl06g00533 397 Gene3D Transferase(Phosphotransferase) domain 1 150 367 - -
Eupl06g00533 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00533 Eupl-Chr6 7787297 7790683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00533 1 396 Glycoside Hydrolase AT3G07070 61.084 3.27e-177 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Eupl06g00533 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00533 - - ming:122090791 590.112