Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00511 ATGGTCAAAAATTTTATTGGCTTAGGGAACTTGGTGACTTACCAGCAGACCGGTGTGGCACTTCTGGAAGCCATCTCAACGACAAAATTTGAAGGCCTTGGTGGAGAATTCCATCTGATTAATGGGCAGTTGCAATCACCAATTTTTCAGATTGTCAATGTGATCGGAAAGGGGGAAAGAGAGATTGGATTTTGGACGCCAACTTACAGGATATCCCGTGAACTTGAATCGACCAGCAAGAAAAATTCCAAGGATACCCTTGGACCGGTCATCTGGCCTGGAGAATCAACGACTGTACCAAAGGGTTGGTTGATTCGACATAAACATTTAAGGGTCGGAGTTCCAAATAACGTATCGTTTAGGGGATTTGTGGAAGTGCAGAAAGATCCTCTCACCAACACGACAAACGCGACTGGCTTCTGTATAGATGTGTTTGATGCTGTAGTGAAGACTCTACTATTTCCCGTTACTTGTGAGTTCATTCCCTTCGAAGATGAGAAAGGTCAAAGTGCAGGGTATTATAACGATCTGATCTACCAAGTGTACCTCAAGGAATTCGATGCGGTGGTAGGAGATGTAACGATTGAACTCAACCGATCAGCTTATTTAGATTTTACAACGGCTTATACAGATTTCGGGGTGTCGATGATAGTGCCTATCGAGAAGGATGAGAGGAAGAAGGGATGGATTTTCTTGAAGCCTTTGACGATGGATCTTTGGTTGGCGACCGGGGCAGCATTTGTATTCACTGGCATCGTTGTGTGGGTTCTTGAGCACCGTATAAATGAAGAGTTCAGGGGATCTCCCACCCAACAACTCGGCACCATCTTTTGGTTCTCCTTCTCCACGTCCGTCTTTGCACACAGTTCCGGGAGAGGGTGGCAAGTAACTTGTCACGATTCGTGTTGA 909 0.4543 MVKNFIGLGNLVTYQQTGVALLEAISTTKFEGLGGEFHLINGQLQSPIFQIVNVIGKGEREIGFWTPTYRISRELESTSKKNSKDTLGPVIWPGESTTVPKGWLIRHKHLRVGVPNNVSFRGFVEVQKDPLTNTTNATGFCIDVFDAVVKTLLFPVTCEFIPFEDEKGQSAGYYNDLIYQVYLKEFDAVVGDVTIELNRSAYLDFTTAYTDFGVSMIVPIEKDERKKGWIFLKPLTMDLWLATGAAFVFTGIVVWVLEHRINEEFRGSPTQQLGTIFWFSFSTSVFAHSSGRGWQVTCHDSC* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00511 302 Pfam Ligand-gated ion channel 237 287 IPR001320 GO:0015276|GO:0016020
Eupl06g00511 302 SUPERFAMILY Periplasmic binding protein-like I 16 103 IPR028082 -
Eupl06g00511 302 SMART GluR_14 111 294 IPR001320 GO:0015276|GO:0016020
Eupl06g00511 302 Pfam Ligated ion channel L-glutamate- and glycine-binding site 127 218 IPR019594 GO:0004970|GO:0016020
Eupl06g00511 302 Gene3D - 12 108 - -
Eupl06g00511 302 Gene3D - 109 228 - -
Eupl06g00511 302 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 17 283 IPR015683 -
Eupl06g00511 302 Gene3D - 229 295 - -
Eupl06g00511 302 SUPERFAMILY Periplasmic binding protein-like II 90 245 - -
Eupl06g00511 302 FunFam Glutamate receptor 109 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00511 Eupl-Chr6 7576063 7578624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00511 1 288 Ion Channels AT2G29100 51.389 9.60e-92 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00511 K05387 - msin:131256817 350.132