Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00510 ATGTTGACGGTGTTCGTGCTGACATCCAGCTACACGGCAAGCTTAAGTTCAATTCTTACGGTTCAACAGCTTACACGTACCAACATCCATGATCTCAGAAAGAATGGAGACTACGTGGGATACCAGGAGGACTCCTTTGTGTTGGGACTACTCAGGCGATGGTACTTTGACGACTCCAAGCTAATTGCACTTAGCTCCCCAAAGGAGTACGATGTTGCCCTATCTAAAGGAAGTGGAAATGGAGGAGTTTCTGCCATTGTCGATGAAATCCCTTACATCAATATCTTCATTAATAAGTATTGCGATAAATACACCTCTATCGGGCCTATATACAACACCGATGGATTTGGCTTTGTCTTTCCGAAAGGTTCCCATCTCGTGCCCGAGGTTTCAAAAGCAATCTCGAAGTTGAAAAGCCAAGGCACGATTGAGGAAATCAACAAGAAATGGTTTGGTAACATATGTGAAGGTCAAGTCATCGCAGCCCCTTCAAGCATTCTCAGTCTGAATAGCTTCCGAGGCCTCTTCCTCATCACCGGAATAGCTTCGACATTCGCACTCTTGTTATTCTTATGTTTCTTCTTTCTCGAGGACAAACTTATTGCAACAGCCGTTGATCCTGAAAACAACTCCATCTGCCATAGATTCATCAAGGTCTTCAAACACTTCTACCAAGAGTCAGCAATCAGATCTAGTAATGTTTTGAAAAAGCTGTCAAGCGATTCCAACAACACTGGTACCATCGTGAACGTTCATTTAGATGACACAGTATCTAGAACCTCTCTTTCAGAGCCTGAGGGTATTCAATTTCAATCTCCACATACACCAATCAGTACTCCAGAAATATCCCAAACTCTAGATGAAGAAGGCATGTACTTCTGTTCATGA 888 0.4302 MLTVFVLTSSYTASLSSILTVQQLTRTNIHDLRKNGDYVGYQEDSFVLGLLRRWYFDDSKLIALSSPKEYDVALSKGSGNGGVSAIVDEIPYINIFINKYCDKYTSIGPIYNTDGFGFVFPKGSHLVPEVSKAISKLKSQGTIEEINKKWFGNICEGQVIAAPSSILSLNSFRGLFLITGIASTFALLLFLCFFFLEDKLIATAVDPENNSICHRFIKVFKHFYQESAIRSSNVLKKLSSDSNNTGTIVNVHLDDTVSRTSLSEPEGIQFQSPHTPISTPEISQTLDEEGMYFCS* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00510 295 Pfam Bacterial extracellular solute-binding proteins, family 3 6 153 IPR001638 -
Eupl06g00510 295 Gene3D - 1 48 - -
Eupl06g00510 295 FunFam Glutamate receptor 68 116 - -
Eupl06g00510 295 SMART GluR_14 3 153 IPR001320 GO:0015276|GO:0016020
Eupl06g00510 295 Pfam Ligand-gated ion channel 154 182 IPR001320 GO:0015276|GO:0016020
Eupl06g00510 295 Gene3D - 117 151 - -
Eupl06g00510 295 SUPERFAMILY Periplasmic binding protein-like II 5 152 - -
Eupl06g00510 295 Gene3D - 84 116 - -
Eupl06g00510 295 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 3 196 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00510 Eupl-Chr6 7575072 7576054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00510 8 231 Ion Channels AT2G29110 42.982 3.47e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00510 K05387 - msin:131256816 222.246