Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00499 ATGGGTCATTGCTTCAGCAAAAGCAAGGTTTCAGAACCAGGTGTTAATGGGTATGGAACAACAGGAGGAGGTGTTGCTAGGTATCAACAAAGAACCCAAGAGCCTGCTGTTCAGCAATCCAAACCTCCAGCTCAGCAGACCCATCCACTGCCCGAAAGGCGACCCGCGCAGCCACAGCCCTCTTCACCGTTAAAACCATCTTCGTTGACCCCGAAACCTAAGCCTGCTCACTTGCTGGATACGATCCTCGGAAAGCCATTTGAAGATGTTAAGGCCTACTACACTCTTGGAAAAGAACTGGGTAGGGGCCAATTTGGGGTAACTTACCATTGTACTGAGAATTCGACCGGTCATTCCTATGCTTGCAAGTCGATATCGAAGAGAAAGCTTGTTAATAAAAATGATAAGGAGGATATAAAGAGGGAAATTCAGATCATGCAGCATTTAACTGGGCAGGCTAACATTGTGGAATTCAAGGGAGCTTATGAGGATAAGCAATCGGTACACCTTGTGATGGAGCTTTGCGCTGGTGGAGAGCTCTTTGATCGGATAATTGCTAAGGGACATTACACTGAGAGGGCGGCTGCAACGATCTGCAGAGCCATTGTGAACGTTGTCCACATTTGTCATTTCATGGGTGTAATGCATCGAGATCTCAAACCTGAGAATTTCTTGCTCTCGAGCAAGGATGAAGGTGCACTTTTGAAGGCAACGGATTTTGGGCTGTCTGTTTTCATTGAGGAAGGTAAGGTGTACCGGGATATAGTAGGGAGTGCATACTATGTTGCTCCTGAAGTACTGCGCCGTAGTTATGGGAAAGAAATAGATATCTGGAGTGCGGGGGTTATCTTGTATATTCTTCTCAGTGGCGTACCTCCTTTCTGGGCTGAAACGGAGAAGGGAATATTCGATGCTGTACTGCAGGGAGAAATTGACTTTGAAAGTGCACCCTGGCCAACAATATCAAACAGTGCTAAAGATCTGGTTAGAAAGATGCTGACACAGGACCCCAAGAAACGGATTACTTCTGTGCAGGTTCTTGATCACCCATGGATTAGAGAAGATGGAGAGGCATCTGACAAGCCAATAGACAGTGCAGTTCTATCTCGGATGAAGCAATTCAGGGCAATGAACAAGCTCAAAAAGCTTGCACTGAAGGTCATTGCGGAAAATCTTTCTGAAGAAGAAATCAAAGGGCTGAAAGCAATGTTTACAAACATGGACACTGACAAAAGTGGCACAATCACCTATGAAGAACTGAAGACGGGTTTGGCTCGACTTGGGTCTAAGCTCTCGGAGACTGAAGTCAAGCAGCTCATGGATGCTGCTGATGTGGATGGAAATGGGACCATTGATTACATCGAATTCATCACTGCCACAATGCATAGACACCGTTTAGAAAGAGATGAACATCTATACAAAGCCTTTCAGTATTTTGATAAAGATAAGAGCGGGTTTATTACTAGAGATGAATTGGAAATGGCCATGAAGGAATATGGAATGGGGGATGAAGACAGCATTAAGGAAATTATATCAGAGGTGGACACAGATAATGATGGGAGGATCAACTACGAGGAGTTCTGTACAATGATGAGAAGTGGAATGCAGCATCCAGGGAAGCTCTTCTAG 1629 0.4512 MGHCFSKSKVSEPGVNGYGTTGGGVARYQQRTQEPAVQQSKPPAQQTHPLPERRPAQPQPSSPLKPSSLTPKPKPAHLLDTILGKPFEDVKAYYTLGKELGRGQFGVTYHCTENSTGHSYACKSISKRKLVNKNDKEDIKREIQIMQHLTGQANIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAATICRAIVNVVHICHFMGVMHRDLKPENFLLSSKDEGALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRSYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAVLQGEIDFESAPWPTISNSAKDLVRKMLTQDPKKRITSVQVLDHPWIREDGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFTNMDTDKSGTITYEELKTGLARLGSKLSETEVKQLMDAADVDGNGTIDYIEFITATMHRHRLERDEHLYKAFQYFDKDKSGFITRDELEMAMKEYGMGDEDSIKEIISEVDTDNDGRINYEEFCTMMRSGMQHPGKLF* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00499 542 FunFam calcium-dependent protein kinase 1 180 359 - -
Eupl06g00499 542 Pfam EF-hand domain pair 400 460 IPR002048 GO:0005509
Eupl06g00499 542 Pfam EF-hand domain pair 470 532 IPR002048 GO:0005509
Eupl06g00499 542 Gene3D Phosphorylase Kinase; domain 1 96 179 - -
Eupl06g00499 542 SUPERFAMILY EF-hand 391 531 IPR011992 -
Eupl06g00499 542 Gene3D Transferase(Phosphotransferase) domain 1 180 360 - -
Eupl06g00499 542 ProSitePatterns EF-hand calcium-binding domain. 480 492 IPR018247 -
Eupl06g00499 542 Gene3D - 361 536 - -
Eupl06g00499 542 MobiDBLite consensus disorder prediction 23 46 - -
Eupl06g00499 542 MobiDBLite consensus disorder prediction 53 70 - -
Eupl06g00499 542 FunFam Calcium-dependent protein kinase 1 360 535 - -
Eupl06g00499 542 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Eupl06g00499 542 ProSiteProfiles EF-hand calcium-binding domain profile. 395 430 IPR002048 GO:0005509
Eupl06g00499 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Eupl06g00499 542 ProSiteProfiles EF-hand calcium-binding domain profile. 467 502 IPR002048 GO:0005509
Eupl06g00499 542 ProSitePatterns EF-hand calcium-binding domain. 444 456 IPR018247 -
Eupl06g00499 542 CDD EFh 474 532 IPR002048 GO:0005509
Eupl06g00499 542 ProSitePatterns EF-hand calcium-binding domain. 515 527 IPR018247 -
Eupl06g00499 542 ProSiteProfiles EF-hand calcium-binding domain profile. 431 466 IPR002048 GO:0005509
Eupl06g00499 542 MobiDBLite consensus disorder prediction 1 77 - -
Eupl06g00499 542 FunFam Calcium-dependent protein kinase 1 96 179 - -
Eupl06g00499 542 CDD STKc_CAMK 94 351 - -
Eupl06g00499 542 PANTHER SERINE/THREONINE-PROTEIN KINASE 89 527 - -
Eupl06g00499 542 ProSitePatterns EF-hand calcium-binding domain. 408 420 IPR018247 -
Eupl06g00499 542 ProSiteProfiles Protein kinase domain profile. 94 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00499 542 ProSiteProfiles EF-hand calcium-binding domain profile. 503 537 IPR002048 GO:0005509
Eupl06g00499 542 SMART serkin_6 94 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00499 542 Pfam Protein kinase domain 94 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00499 542 SMART efh_1 435 463 IPR002048 GO:0005509
Eupl06g00499 542 SMART efh_1 399 427 IPR002048 GO:0005509
Eupl06g00499 542 SMART efh_1 506 534 IPR002048 GO:0005509
Eupl06g00499 542 SMART efh_1 471 499 IPR002048 GO:0005509
Eupl06g00499 542 SUPERFAMILY Protein kinase-like (PK-like) 94 359 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00499 Eupl-Chr6 7379617 7388486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00499 23 542 EF-hand Containing Proteins AT4G04720 76.894 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Eupl06g00499 Pkinase 2.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00499 K13412 - nnu:104610927 927.546