Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00495 ATGGGTGACTTGGATCCTTCATCTGATGACACTTCTGATGATTCTAGAGAGGTAACAAGTCAGGATTCTAAGGTGGAGTTCTCAGAAGATGAAGAAACACTCATTGCTAGGATGTTTAATCTGGTTGGAGAGAGATGGTCTTTGATTGCTGGGAGAATCCCCGGACGGACGGCGGAAGAGATCGAGAAGTACTGGACTTCGAGGTATTCTTCAAGTGAATGA 222 0.4505 MGDLDPSSDDTSDDSREVTSQDSKVEFSEDEETLIARMFNLVGERWSLIAGRIPGRTAEEIEKYWTSRYSSSE* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00495 73 MobiDBLite consensus disorder prediction 9 29 - -
Eupl06g00495 73 SMART sant 23 71 IPR001005 -
Eupl06g00495 73 SUPERFAMILY Homeodomain-like 26 69 IPR009057 -
Eupl06g00495 73 CDD SANT 26 65 IPR001005 -
Eupl06g00495 73 Gene3D - 26 68 - -
Eupl06g00495 73 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 73 IPR017930 -
Eupl06g00495 73 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 25 70 - -
Eupl06g00495 73 MobiDBLite consensus disorder prediction 1 29 - -
Eupl06g00495 73 FunFam MYB-like transcription factor 26 68 - -
Eupl06g00495 73 Pfam Myb-like DNA-binding domain 24 66 IPR001005 -
Eupl06g00495 73 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00495 Eupl-Chr6 7336964 7338590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00495 27 70 MYB Transcription Factor Family AT5G14750 52.273 2.24e-13 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl06g00495 Myb_DNA-binding 8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00495 - - ming:122091983 114.775