Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl06g00477 | ATGATGCCCAACAACGGCGCTACAGGGAGCGACGATGCTTCGTCGGCTGGTGGGGCCGGTGGTGCAGCGCTAAAGAAAGGGCCGTGGACGGCTGCTGAGGACGCGATCCTGATGGAGTATGTGAAGAAACAAGGAGAAGGTAACTGGAACGCTGTTCAGAAGAACTCTGGGTTGTCTCGGTGTGGAAAGAGCTGTCGTCTTCGTTGGGCTAATCATCTCAGGCCTAATCTTAAGAAGGGTTCCTTCTCTCCCGATGAAGAACGTCTCATTCTCGAGCTTCACGCCAAGCTCGGCAACAAATGGGCTCGCATGGCCGCTCAGTTACCTGGGCGAACAGACAACGAGATCAAGAACTACTGGAACACCCGAGTCAAGCGACGCCAACGCGCCGGATTACCGCTCTATCCGCACGATATACAGAAACAAGTGGCTGCGTTCCACCTTCACCAGCATCACCAGCACCGTCCATCTCCGTCTCCTCCACCACCGACGCAGTTCTCGTCGCAGCAGCTGAAACCTAATTTCGGGTCTCCGTTATCCCTGTTTGATCCGATGAATTTTTCTTCGACGACCCCTTTTATGGCCCACCACAACAGTACCCCTTTTCTTCCCACTCAAATTCATGGACTGAAGCGGTTCCAGGGTAGCAATGTCGGGTTCTCTCAACCCTTTTCTCATCCTCCTCCTACTCTACCAACTTCATCATCTCTGTTCAATCATAGTCTGTCTACCCAATTGTCACAAGCACCGACGCTTCAATTTAATTCCGGCAATTACGACTTTAATCCACCGCCGCTCATGCGTACCCATTTCGAACCCGAAGGCATGGGTCCTCCCGGTTCTGCTTTCTCCATGAAATTGGAGCTCCCTTCAAGCCAACTACCCCAGCCAGCAGCTAACGCTGTTGCCTCGGGCACTACCAGCGATTATAAGATCACCAGTTCATTAGCGAGGAGTAATAGTGGGTTACTGGATGCTCTGTTACAGGAAGCCCAAGCTATGGGTGGCAGGGATGATTCGAGGAGAGAAGGGTTGTTATCATCTCAAGAAGAAAAATGCGGATTTACTGGATTAGTCAGTGATGCCCCACCTTCCGGGTCATATTTCTGCGAGAGCACCACCACCCCACCATTAGGATCTGCAAGCCACTGGGAAGATTCAAGCTCTGCCCATTCTTCCATTGGGGTGAAGATGAAGAAGGAACAAACGGATGAGATCAATTCTATTGACGACGACGACGACTTGTCCAGTTTGCTCGATATTATCCCATCTACCATGTTGGTTCCTGAGTTCTACAGCGATAGTGGTGAGATATCAAATGGGCAATCCTCGGGTGCAACCGACGAAGAAATGGGGCTCGATATGCAGCATCTACCTACCACTACCACCACCACCACCAACACCATCCCCGGCCACAACTGGACCCTTGGCGCTTGGAACAACATGCCTGAGATGTGCTAA | 1461 | 0.5168 | MMPNNGATGSDDASSAGGAGGAALKKGPWTAAEDAILMEYVKKQGEGNWNAVQKNSGLSRCGKSCRLRWANHLRPNLKKGSFSPDEERLILELHAKLGNKWARMAAQLPGRTDNEIKNYWNTRVKRRQRAGLPLYPHDIQKQVAAFHLHQHHQHRPSPSPPPPTQFSSQQLKPNFGSPLSLFDPMNFSSTTPFMAHHNSTPFLPTQIHGLKRFQGSNVGFSQPFSHPPPTLPTSSSLFNHSLSTQLSQAPTLQFNSGNYDFNPPPLMRTHFEPEGMGPPGSAFSMKLELPSSQLPQPAANAVASGTTSDYKITSSLARSNSGLLDALLQEAQAMGGRDDSRREGLLSSQEEKCGFTGLVSDAPPSGSYFCESTTTPPLGSASHWEDSSSAHSSIGVKMKKEQTDEINSIDDDDDLSSLLDIIPSTMLVPEFYSDSGEISNGQSSGATDEEMGLDMQHLPTTTTTTTNTIPGHNWTLGAWNNMPEMC* | 487 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl06g00477 | 486 | SUPERFAMILY | Homeodomain-like | 24 | 120 | IPR009057 | - | |
Eupl06g00477 | 486 | MobiDBLite | consensus disorder prediction | 372 | 396 | - | - | |
Eupl06g00477 | 486 | MobiDBLite | consensus disorder prediction | 372 | 401 | - | - | |
Eupl06g00477 | 486 | CDD | SANT | 28 | 73 | IPR001005 | - | |
Eupl06g00477 | 486 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 74 | 128 | IPR017930 | - | |
Eupl06g00477 | 486 | FunFam | MYB-related transcription factor | 25 | 78 | - | - | |
Eupl06g00477 | 486 | CDD | SANT | 81 | 122 | IPR001005 | - | |
Eupl06g00477 | 486 | PANTHER | TRANSCRIPTION FACTOR MYB33-RELATED | 8 | 450 | - | - | |
Eupl06g00477 | 486 | Gene3D | - | 25 | 78 | - | - | |
Eupl06g00477 | 486 | Pfam | Myb-like DNA-binding domain | 79 | 122 | IPR001005 | - | |
Eupl06g00477 | 486 | Pfam | Myb-like DNA-binding domain | 26 | 73 | IPR001005 | - | |
Eupl06g00477 | 486 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 21 | 73 | IPR017930 | - | |
Eupl06g00477 | 486 | Gene3D | - | 81 | 155 | - | - | |
Eupl06g00477 | 486 | MobiDBLite | consensus disorder prediction | 147 | 175 | - | - | |
Eupl06g00477 | 486 | ProSiteProfiles | Myb-like domain profile. | 21 | 73 | IPR001005 | - | |
Eupl06g00477 | 486 | FunFam | Transcription factor MYB97 | 81 | 156 | - | - | |
Eupl06g00477 | 486 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Eupl06g00477 | 486 | ProSiteProfiles | Myb-like domain profile. | 74 | 124 | IPR001005 | - | |
Eupl06g00477 | 486 | SMART | sant | 78 | 126 | IPR001005 | - | |
Eupl06g00477 | 486 | SMART | sant | 25 | 75 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl06g00477 | Eupl-Chr6 | 7028932 | 7032012 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl06g00477 | 21 | 486 | MYB Transcription Factor Family | AT2G32460 | 38.990 | 1.63e-80 | 256 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Eupl06g00477 | Myb_DNA-binding | 5.4e-14 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl06g00477 | K09422 | - | nnu:104612781 | 599.356 |