Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00463 ATGAATGAAGAGGACGAGACCTCTCTCAGCCTGAAGGGTCCTCCATCTCCACTCAAACTCCGGGTTAATTCCCCGGACCCATCGAGCACAGTAGTTGGTCTGCAGCGGCTTGAGAACATAGTACCGGAAAACAGTTGGATATCAAGGACTGTGAGGCCTTATGTTCGATCTAAAATGCCCCGTCTTCGATGGACTCCGGATCTTCACGACGTCTTTCTTCATGCAGTCCATCGGCTCGGTGGAGAAGAAAGGGCTACACCGAAGCTGGTTTGGGAGATGATGGATGTTAGGGGACTCACCTTATCCCACGTAAAGAGCCATCTTCAGATGTACCGGAGCATGAAGCATGAGCAGACAATACAAGAAGCGGCTCGGGCTGCAAAGAGGAATGCTACAGTGTATGATACCCTATCTTCGAATCGCATCTCAACTTCCATGCCATGCTCTTCACAACACGATCACAATCAGGAACACATGGGACCCTCAAATTACAAAACACGTGCAGGAGAAGCAAAAGTCAGGAAAGGGATGAAAAATTGTGAGGAGTCGAACCAGGAATACCAGAGGAGACCAAAATCCTACATCATCTTTGAGGGTCTTCTCAAAAGCTGCTTCCCCAAAGAGAACGAGGAACAGAAAGAAATAGAGATCTACGATGAATTGCCGAACATATATGTTGGTGAGAGAGCCAAGCGTCCAAGATTGGAAGACCCACCTGAGACTGATGCAGATGGAGAAGTTGATAGCACATTGTCCCTATCTTTGTTAAAGAAGGCTTCCCTACCATTGAAGCTGAAGTACAATCTGATTGAAGCTGGGAAGAATGTCTCCCTTGGTCTCTCTTTAGATTTAAAATCCCCTTTTTCTCTTACGTGA 876 0.4692 MNEEDETSLSLKGPPSPLKLRVNSPDPSSTVVGLQRLENIVPENSWISRTVRPYVRSKMPRLRWTPDLHDVFLHAVHRLGGEERATPKLVWEMMDVRGLTLSHVKSHLQMYRSMKHEQTIQEAARAAKRNATVYDTLSSNRISTSMPCSSQHDHNQEHMGPSNYKTRAGEAKVRKGMKNCEESNQEYQRRPKSYIIFEGLLKSCFPKENEEQKEIEIYDELPNIYVGERAKRPRLEDPPETDADGEVDSTLSLSLLKKASLPLKLKYNLIEAGKNVSLGLSLDLKSPFSLT* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00463 291 MobiDBLite consensus disorder prediction 144 164 - -
Eupl06g00463 291 NCBIfam myb-like DNA-binding domain, SHAQKYF class 60 114 IPR006447 GO:0003677
Eupl06g00463 291 SUPERFAMILY Homeodomain-like 58 114 IPR009057 -
Eupl06g00463 291 Gene3D - 59 117 - -
Eupl06g00463 291 MobiDBLite consensus disorder prediction 1 29 - -
Eupl06g00463 291 Pfam Myb-like DNA-binding domain 62 112 IPR001005 -
Eupl06g00463 291 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 49 198 IPR046955 GO:0003700
Eupl06g00463 291 FunFam Myb family transcription factor 58 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00463 Eupl-Chr6 6839065 6843576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00463 24 117 G2-like Transcription Factor Family AT2G42660 55.340 2.40e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl06g00463 Myb_DNA-binding 3.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00463 - - psom:113352637 256.529