Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00450 ATGGACTCAACCAGTACTCAGTTCTCTGGTGTAGAATTCCCGGTGAATCTCAATTGTAGGGACGATGATGATCAATCCAATGACAAACGGGTTATCGATGAAATGGATTTCTTCTCTGAGAAAACCCGTTTCCAAGATTTCGATAAGGCCTCCAATATCAATATCAAGAAAGAGGATTTGCACGACGGTCGGACTTCGAGGTTCGATTTTGACGTTAACACTGGTTTGAATCTCCGTACTACAAACAATGGTAGTGACGAATCAACGGTGGATGATGGGATATCAGCAAACGTGGATGATAAGAGAGGCAAGAGTGAGCTTGTAGCCTTGCAAGCCGAGCTTGTCCGGATGAGGGCAGAGAATCAGACATTGAAAGAGATGCTGAACCAAGTTACCACCAACTACAACGCCTTACAGATGCATCTCATAACACTGATGCAGCAACAGAATCGAAAAACCGAAAGTATGCAAGAAGATGAGATCATTGAGAGAAAACTAGAAGAGAAGAAACATGAAGGCGGTGGAGGGTTATTAGTACCAAGACAGTTTATAGATCTAGGCCCGGCCGCCGCTGTCGAAATCGATGAGCCTTCTCATTCTTCATCAGAAGAAAGAAGCCGCGATCACAACAATGAAGAAGTAGTGTCGAAGTCGCAAAAGAATGGTAACAACAATGAGATTGTTCCATTTGATCAGGAGAGCAGAGGAATTGGTAGGGAAGATAGCCCTGACCAGGCATCACAAGGCTGGTTACCTAACAAAGTCCCTAAATTGAATCCCTCGAAGAGTGTCGATCAATCCACCGAAGCCACTATGAGGAAAGCCCGAGTCTCAGTTCGAGCACGATCCGAAGCACCAATGATCACTGATGGATGCCAATGGCGAAAGTATGGGCAAAAAATGGCAAAAGGGAACCCATGCCCTCGAGCTTACTATCGGTGCACCATGGCTGCCGGATGTCCCGTTCGCAAACAAGTTCAAAGATGTGCGGAGGACAGAACAATATTGATAACAACTTATGAAGGCAATCATAATCATCCACTCCCTCCAGCAGCAATGGCAATGGCGTCGACGACATCGGCAGCAGCGTGTATGCTGCTTTCAGGATCGATGTCGAGTGCCGATGGGCTAATTAACTCAAATTTCCTAGCAAGGACTCTCTTGCCTTGTTCATCAAGCATGGCAACAATCTCAGCTTCAGCCCCTTTCCCAACGGTCACATTGGATCTTACCCAAAATCCCAACCCTTTACAGTTCCAAAGGCCACCAATCCCCTTCCTCACCCCACCAGCCCCACAAGTACCACAGGTCTTCGGCCAATCTCTCTATAACCAATCGAAATTCTCCGGCCTTCAGACCTCACAAGACCAATTCATCCACCAGTCACCGCCACTGCCACAACAACCACAACACCAAGCTCAACAACCATCATTGGCTGACACAGTGAGTGCTGCAACTGCCGCCATCACCGCCGATCCAAACTTCACGGCAGCTCTAGCGGCAGCAATCACCTCAATCATCGGTGGTGCCCATCAAACAAACAACAACAATGGTGACAGTGGCAACACCACTAACAACAGCAACAACAACAAAATCAGCAATTCAAATTTCTCAGGGAATTAA 1623 0.4707 MDSTSTQFSGVEFPVNLNCRDDDDQSNDKRVIDEMDFFSEKTRFQDFDKASNINIKKEDLHDGRTSRFDFDVNTGLNLRTTNNGSDESTVDDGISANVDDKRGKSELVALQAELVRMRAENQTLKEMLNQVTTNYNALQMHLITLMQQQNRKTESMQEDEIIERKLEEKKHEGGGGLLVPRQFIDLGPAAAVEIDEPSHSSSEERSRDHNNEEVVSKSQKNGNNNEIVPFDQESRGIGREDSPDQASQGWLPNKVPKLNPSKSVDQSTEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMAMASTTSAAACMLLSGSMSSADGLINSNFLARTLLPCSSSMATISASAPFPTVTLDLTQNPNPLQFQRPPIPFLTPPAPQVPQVFGQSLYNQSKFSGLQTSQDQFIHQSPPLPQQPQHQAQQPSLADTVSAATAAITADPNFTAALAAAITSIIGGAHQTNNNNGDSGNTTNNSNNNKISNSNFSGN* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00450 540 Gene3D WRKY domain 273 350 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00450 540 MobiDBLite consensus disorder prediction 197 215 - -
Eupl06g00450 540 ProSiteProfiles WRKY domain profile. 283 349 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00450 540 Coils Coil 107 134 - -
Eupl06g00450 540 Pfam WRKY DNA -binding domain 290 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00450 540 MobiDBLite consensus disorder prediction 454 478 - -
Eupl06g00450 540 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 74 520 IPR044810 GO:0003700
Eupl06g00450 540 MobiDBLite consensus disorder prediction 514 540 - -
Eupl06g00450 540 MobiDBLite consensus disorder prediction 216 230 - -
Eupl06g00450 540 SUPERFAMILY WRKY DNA-binding domain 281 349 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00450 540 MobiDBLite consensus disorder prediction 246 269 - -
Eupl06g00450 540 FunFam probable WRKY transcription factor 31 273 350 - -
Eupl06g00450 540 SMART WRKY_cls 288 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00450 540 MobiDBLite consensus disorder prediction 194 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00450 Eupl-Chr6 6621944 6624971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00450 5 522 WRKY Transcription Factor Family AT1G62300 53.707 4.76e-157 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl06g00450 WRKY 2.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00450 - - nnu:104588301 699.893