Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00435 ATGATGGCGAATCAGCCTCAATCGCTATCTCTGAACCCTTCTTTCGGCGGTCCTAATAACGCCTCTTCTGCGAACGCCACCGCTGCTCAGGCTAACAAAGACAGGAAAATGGCGTCGGCGGAGCAGTTGGTGTTTGAGCTCAGTAATCCCGATCTCAGAGAAAACGCTCTCCTTGATCTCTCAAAGAAGAGAGAGATATTTCAAGATCTTGCACCATTGTTGTGGAATTCTTTCGGTACCATTGCTGCACTCTTACAGGAGATTGTGTCTATATACCCTGTTCTATCACCACCAACCCTTACTCCAGGAGCATCAAACCGAGTTTGCAACGCACTTGCTCTTCTTCAGTGTGTAGCTTCTCACCCGGATACGAGGACGCTGTTTCTCAATGCTCATATACCTTTGTATCTGTACCCATTTCTAAATACTACAAGCAAGACAAGACCATTTGAATATTTGAGGCTTACCAGCTTGGGTGTCATTGGTGCTCTTGTAAAGGTTGATGATACAGAAGTAATAAGTTTCCTTCTATCGACAGAAATAATTCCCTTGTGTCTACGGACCATGGAGATGGGTAGTGAACTTTCAAAAACAGTGGCTACCTTTATTGTTCAAAAAATTCTACTGGATGATGTGGGGCTGCGATATATATGTGCTACAGCAGAGCGATTTTTTGCAGTAGGTCGTGTTTTGGGAACGATGGTTACTTCACTTTCTGAACAACCCTCGTCACGGCTGCTTAAACATATAATTCGTTGTTATCTTAGACTTTCAGATAATCAAAGGGCTTGTGAAGCATTAAGAAATTGCCTTCCTGAAATGTTAAGAGATGCAACCTTCAGCAGTTGCCTTCGTGAAGATCCAACAACCAAGCGGTGGTTACAACAGCTGATCCATAATGTGTCAGGAGGAAATCGGGTGGCAGCACTTCAGGCTGGGGGAGGGCTTGATCATATGCTAGCTAACCAAACAAGGGTTATATAG 984 0.4421 MMANQPQSLSLNPSFGGPNNASSANATAAQANKDRKMASAEQLVFELSNPDLRENALLDLSKKREIFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPTLTPGASNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGRVLGTMVTSLSEQPSSRLLKHIIRCYLRLSDNQRACEALRNCLPEMLRDATFSSCLREDPTTKRWLQQLIHNVSGGNRVAALQAGGGLDHMLANQTRVI* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00435 327 SUPERFAMILY ARM repeat 49 270 IPR016024 -
Eupl06g00435 327 Gene3D - 31 302 IPR011989 -
Eupl06g00435 327 Pfam Cell differentiation family, Rcd1-like 43 301 - -
Eupl06g00435 327 PANTHER UNCHARACTERIZED 31 304 IPR007216 GO:0006402|GO:0030014
Eupl06g00435 327 MobiDBLite consensus disorder prediction 1 32 - -
Eupl06g00435 327 FunFam Cell differentiation protein RCD1 33 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00435 Eupl-Chr6 6491644 6510009 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Eupl06g00435 Rcd1 2.6e-129 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00435 K12606 - nnu:104594061 584.334