Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00424 ATGGCAATTTGGACTTCAAAAGGAGGACAGAGAAACCGACATGGTGCAAACAATGAGATGAAGAGATCACAAGAAATCTCAGATGTTGGGATTTCAACAATGGAAACAGTTCGAAGGCTCTGTGACAATGAAGATGAAAAACAACAACAAAAAGATGCAGCATTGTCATTGTCAAAATCAAAGGTTCAAATTAAGAAAAATAAGACAACCCAAGCGGATGTTGAAAAGATTTCAGATAAGAAAAAGCATCAAAGGGAGTGTGTCTTGCGCAAGAGGAAAACTCTGGGTGATGATGGGGATGAAGAGTGGATTCCAACAAAGAAGAGAGTGCTAACAACCCGTAAAGATTCTGAGGTTGAGAAGGAGATCAGAAGTTCAAGGAAGGCAAACGTGAAAAGTTCTGGGACCCATAATTTCACTTATATTTCGTCTTCATCATCTTCCTCTACAGTTTTGAATGGTGATGGCAGTATCCTTGAGAGATGCAGCAGATCAATGCACACAAAGGATTCTTTGCATAAACTGGGAAGGGGAAGCAAATGCTCAAGGTGCCATCAGTGTGAGAGAAAGGATAGACGAATTGTTGTTCCATGCTGCAAGTGTAAACAGAAACTATATTGCATCCAATGCATCAAACAATGGTATCCTCAGTTGTCAGAGGAAGAAATTTCTGAGGCTTGCCCATTCTGCCGTGGAAATTGCAACTGCAACTTGTGCTTGCACTCAAGTGGAATTTCCAAGACCTCAAATAGGGATGTTACCAAATCCGAAAAGATCCTGCATGCTCACAAGATAATCCTCTCTCTTCTTCCCTTTCTAAAACAAATACGTGAAGAACAGTCCGAGGAGATGGATATTGAGGCTAAGTTTCAAGGCATATCGTCATGTGAAATGGAATTACCTGAGGCATCCTGTTACAATGACGAACGAGTCTATTGTAACAATTGTGCAACTTCGATTGTTGATCTACATAGAAGCTGCCCCAAATGTTCCTATGAACTCTGCCTTAGCTGCTGCCGGGAAATTCGCGAGGGAAATCTTCTAGGTGGTTCTAGGGAAGTGGTTTTCCATTACCCAAACAGAGGTTATGATTACATCCATGGTGGAGATATGCTTCCAGAGTCTTGTGATGTGAAGAGATCTATGCATCTTCTTGAACAACAGATTGACTGGAAAGTCAATGGTAATGGAGGTGTTCCTTGCCCTCCAAAGGAAATGGGTGGCTGTGGTTATCATGTATTGGAGCTTAAGAGAATCCTCCCTAAAAGTTGGCTTTTGGATTTAGAACTGAAAGCGGAAGTAGCAAGAAGTTGTGAGGTTGGACAAGCTCCTGGCAAGCGCAATGGCATTAATACAGGGAATGAGATGTTGCGGAGAGCAGCTTCCAGAGAAGGCTCCAGTGACAATTACATATATTGTCCATCATCGAGAGACATTCTAAAGGAGGAAGACCTTGTGCATTTCCAAAGACACTGGGCCAACGGGGAACCGGTGATTGTCCGCAATGTGCTTGAAAGCACGTCTGGTTTGAGTTGGGAGCCAATGGTTATGATGCGTGCATTATGTGACAATGTGGATACAAAGACTGGTTCAAAGCTATCAGAAGTGAAAGCTATTGATTGCCTGGCTGGTTGTGAGGTCGAAATTAATACTCACCGGTTTTTCAAAGGCTATACGGAGGGTAGAGCATATGATAATTCCTGGCCCGAGATGCTCAAGCTGAAGGACTGGCCCCCCTCTGCTAAATTTGAGGATCTCTTGCCACGCCATTGTGATGAATTCCTCAGTGCATTGCCATTCCAGGAATATACAGACCCTAAGTCTGGTCTTCTTAATCTTGCTGTGAAGCTGCCACCAGATGTCATAAAGCCGGACATGGGTCCAAAAACATATATTGGTTATGGGGTTGCTGAAGAGCTTGGAAGAGGGGATTCTGTAACTAAGCTTCATTGTGATATGTCGGATGCGGTGAATATTTTGACGCATACTGCAGAAGTAGTGTTGTCTGACACACAGCGTTCCTCAATAGACGTGCTGAAAAAGAAGCACAGAGCTCAAGATGAAAGGGAAGGTCTCAGTACACATGGTATCACAACCGAAACTAAGGAAGCACAAGATGATGAAAAGGGAGGAGACACTTTTCCTGGTTTCCCCGCAGGAACAAATGAGGGTACAGGCAGTGCTCTGTGGGATATTTTCCGGAGAAAAGATGTTCCTAAGCTACAGGCTTACCTTAGAAAGTACTCAAATGAATTTAGGCACACCTATTGTTCTCCAGTTGAGAAGGTTATTCATCCCATTCATGACCAAACTTTCTATTTAACCTTGGAGCACAAAAGGAATCTCAAGGAGGAATTTGGAGTTGAACCATGGACGTTTGAACAAAAACTTGGAGAGGCAGTTTTTATTCCTGCCGGATGTCCACATCAAGTCAGAAATCTTAAGTCATGTACAAAGGTTGCACTTGACTTTGTCTCCCCTGAAAACATCCATGAGTGCTTCCGGTTGACTGAGGAGTTCCGACAACTTCCCAAGAATCACAGGGTCCGAGAAGACAAGCTAGAGATAAAGAAGATGACACTCCATGCCATAAACCAAGCTGTAAAAGATTTAGAAGACTTGATGGCATCCAAAAGCGAGTAG 2643 0.4321 MAIWTSKGGQRNRHGANNEMKRSQEISDVGISTMETVRRLCDNEDEKQQQKDAALSLSKSKVQIKKNKTTQADVEKISDKKKHQRECVLRKRKTLGDDGDEEWIPTKKRVLTTRKDSEVEKEIRSSRKANVKSSGTHNFTYISSSSSSSTVLNGDGSILERCSRSMHTKDSLHKLGRGSKCSRCHQCERKDRRIVVPCCKCKQKLYCIQCIKQWYPQLSEEEISEACPFCRGNCNCNLCLHSSGISKTSNRDVTKSEKILHAHKIILSLLPFLKQIREEQSEEMDIEAKFQGISSCEMELPEASCYNDERVYCNNCATSIVDLHRSCPKCSYELCLSCCREIREGNLLGGSREVVFHYPNRGYDYIHGGDMLPESCDVKRSMHLLEQQIDWKVNGNGGVPCPPKEMGGCGYHVLELKRILPKSWLLDLELKAEVARSCEVGQAPGKRNGINTGNEMLRRAASREGSSDNYIYCPSSRDILKEEDLVHFQRHWANGEPVIVRNVLESTSGLSWEPMVMMRALCDNVDTKTGSKLSEVKAIDCLAGCEVEINTHRFFKGYTEGRAYDNSWPEMLKLKDWPPSAKFEDLLPRHCDEFLSALPFQEYTDPKSGLLNLAVKLPPDVIKPDMGPKTYIGYGVAEELGRGDSVTKLHCDMSDAVNILTHTAEVVLSDTQRSSIDVLKKKHRAQDEREGLSTHGITTETKEAQDDEKGGDTFPGFPAGTNEGTGSALWDIFRRKDVPKLQAYLRKYSNEFRHTYCSPVEKVIHPIHDQTFYLTLEHKRNLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVALDFVSPENIHECFRLTEEFRQLPKNHRVREDKLEIKKMTLHAINQAVKDLEDLMASKSE* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00424 880 Pfam JmjC domain, hydroxylase 723 824 IPR003347 -
Eupl06g00424 880 FunFam Transcription factor jumonji domain-containing protein 468 850 - -
Eupl06g00424 880 ProSiteProfiles Zinc finger RING-type profile. 181 231 IPR001841 -
Eupl06g00424 880 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 180 250 IPR018866 -
Eupl06g00424 880 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 43 878 IPR045109 GO:0032454|GO:0033169
Eupl06g00424 880 ProSiteProfiles JmjC domain profile. 606 841 IPR003347 -
Eupl06g00424 880 MobiDBLite consensus disorder prediction 38 52 - -
Eupl06g00424 880 MobiDBLite consensus disorder prediction 679 720 - -
Eupl06g00424 880 MobiDBLite consensus disorder prediction 679 710 - -
Eupl06g00424 880 Gene3D Cupin 473 850 - -
Eupl06g00424 880 SMART cupin_9 587 841 IPR003347 -
Eupl06g00424 880 MobiDBLite consensus disorder prediction 1 77 - -
Eupl06g00424 880 SUPERFAMILY Clavaminate synthase-like 484 868 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00424 Eupl-Chr6 6370950 6377774 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Eupl06g00424 JmjC 1.5e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00424 K15601 - nnu:104588030 1110.13