Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00419 ATGATTGCATCGTCAAGGGGAAGAACACTTGAACTGCGCTTTCGACTGGGCTTCTGTGTTCTTCTTTTGTTGTGTATCGGAGCCGAAACTAAGTGCAGGAGGGGGTGTGACCTTGCCATAGCTTCTTACTATGTGTGGGAAGGATCAAATCTCACTTACATCGGTGATATCTTAGGTAAAGAAATTACCGAAATTCTCCGATACAATCCCGATATCCCAAATCAAGACAGCATTCAAATTGGTAGCCGAGTAAACATACCGTTCTCATGCGATTGCTTAAACGGCGATTTCTTAGGCCATACGTTCAATTACATCACTCAGCCTAGTGACACGTATGTTAAGATTGCTCGAACTGCTTTCGCGAACCTTACGACAGTGGATTGGGTGCAGAGGGTGAACCATTACGACTACACACAAATACCAAACAACGTACCGATTAACGTTACGGTGAATTGTTCGTGTGGTAGTGGTCGTATTTCGAAGGCCTACGGGTTGTTTGCGACGTACCCATTACGTCCCGGTGAGAATTTGTCCTTTGTTGCTGAAGAATCGGGCGTATCGGCTGAGTTGCTGCAGAGTTACAATCCAGGATCAAATTTCAGCTCAGAGAGTGGGCTGGTGTTTGTGCCGGCAAGAGCAGGAATCTCCAGCGGAGCCATTGCTGGCATATCAATTGCAGTAGTAGCTGCTGCACTGTTTATTGCAGTTTGTACATATGTTGGGCTTTCTAGAAGGAAGAAGGTGAATGAGGCATCATTGCTCCCAGCAGCATATGAAGATAATTCTATTCATCGTGGACGTGGTTCTGGAAGTACCTTGACTAAAACTTCAGAGTCAGCTGCTCTTGTTGGTAGTGCTTCCCCAGCACTTACAGGTATCAATGTGGACAAATCGGTGGAGTTCTCATATGAAGAGCTTTCCAAGGCTACAAATGACTTCAGCATGGTTAATAAAATTGGTGAAGGTGGCTTTGGAGCTGTTTACTATGCAGAGCTAAGAGGCGAGAAAGCTGCAATTAAGAAGATGGATATGCAAGCATCAAAGGAATTCCTTGCTGAATTGAAGGTTCTAACACACGTTCATCACTTGAACCTGGTTCGCTTGATAGGATATTGTGTTGAGGGTTCTTTATTCCTAGTTTATGAGTTCATTGAGAATGGCAACTTAAGTGAACATTTGCGTGGCTCAGCAATGGTTGTGACACATTTCTCTGCTTTTAGGGAGGGAGCCGCTGTCATGGTCTACTAG 1248 0.4479 MIASSRGRTLELRFRLGFCVLLLLCIGAETKCRRGCDLAIASYYVWEGSNLTYIGDILGKEITEILRYNPDIPNQDSIQIGSRVNIPFSCDCLNGDFLGHTFNYITQPSDTYVKIARTAFANLTTVDWVQRVNHYDYTQIPNNVPINVTVNCSCGSGRISKAYGLFATYPLRPGENLSFVAEESGVSAELLQSYNPGSNFSSESGLVFVPARAGISSGAIAGISIAVVAAALFIAVCTYVGLSRRKKVNEASLLPAAYEDNSIHRGRGSGSTLTKTSESAALVGSASPALTGINVDKSVEFSYEELSKATNDFSMVNKIGEGGFGAVYYAELRGEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEFIENGNLSEHLRGSAMVVTHFSAFREGAAVMVY* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00419 415 Pfam Protein tyrosine and serine/threonine kinase 315 396 IPR001245 GO:0004672|GO:0006468
Eupl06g00419 415 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
Eupl06g00419 415 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 15 396 IPR044812 GO:0019199|GO:0045087
Eupl06g00419 415 ProSiteProfiles Protein kinase domain profile. 313 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00419 415 SUPERFAMILY Protein kinase-like (PK-like) 294 395 IPR011009 -
Eupl06g00419 415 Gene3D Phosphorylase Kinase; domain 1 293 383 - -
Eupl06g00419 415 FunFam LysM receptor kinase 2 292 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00419 Eupl-Chr6 6260314 6272517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00419 10 396 Receptor kinase-like Gene Family AT3G21630 50.483 1.39e-130 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Eupl06g00419 PK_Tyr_Ser-Thr 4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00419 - K13429 cave:132171920 517.694