Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00407 ATGGCGCAGAGCAGACCTACCTCTCCTTTCTTCGCTACTTTCATTGCTGCTGTACTCTCAAGCGCAATTCTCCTCACTCCGTCTCTCGTTCTTGCCTCTACCGATCCATCCGACTTTCAAGCTCTACAGGTTGTATTCAGCTCATTGAACAATCCTCCTCAGCTAACCGGGTGGAAACCGACTGGCGGTGATCCATGTGGAGAATCATGGAAGGGGGTCACTTGCGAGGGCTCTGCAGTCATTGCGATTCAGGTTCCTGGGTTGGGACTCAGTGGGACCATGGGATACTTGCTTTCGAATTTCTTGTCATTGAGAACTCTGGATTTAAGCAACAACAACATTCATGATTCAATTCCATATCAATTACCGCCGAACCTTACAAGCCTAAATCTTGCAAGCAACAACTTAAGTGGGAATCTTCCTTATTCCATTTCTACCATGGTTTCGCTCATTTACTTGAATGTCAGCCGCAATGCATTCAGCCAGTCAATTGGAGATATTTTTGCGAATCTTCAGGGTCTCTCAGCCTTGGATCTGTCTTATAACAACTTTTCTGGAGATCTTCCTAATTCTATCAGTTCTGTGTCCAACCTTTCTAGTCTCTATTTGCAAAGCAATCAATTAACAGGTTCAGTTAATGTTCTTGCTGATCTTCCACTGACTGATCTAAATATTGCAAACAACAATTTTAGTGGCTGGATTCCACAGGAGTTTAATTCAATCCCAAACCTTATATATGATGGAAATTCCTTTACCAATGGCCCTGCTCCTCCTCCACCACCCTATACCTCACCTCCTCCTAGTAGACCCCGTAATACTCGTAAACGTACTGAGCCACACACAAATACAACTCGGGGATCTGATGGCCAAGGTTCACATTCAGATCATCAGATTAATAAAAAGGGGTTGACAGCAGGCCATATTGTAGGCGTAGTTCTGGGTTCGATAGCGGTTGTTCTATGTGCAATGCTTGCTCTTGTTTTCTGCCTTCGAAAGTTTTCGAAGGGTAAACGTGCGAAGGATAATAATGCAAGGGCTTCTTTGGGTACCCTTTCGGTTGGTGCTGATAAAGTAGTCAACACAGAGATGCAAGAGCAAAGGGTCAAAAGTATGGCTGCCGTAACAGATCTGAAACCCCCACCCACAGAAATATTTATTGGTGAGAGGATACATGGCAAAAATGGCTCTGGATTCTCTGGAATGAGACCAAAAGCCCCTATTACTGCGACTACCTATACTGTTGCTTCTCTTCAAACAGCAACAAACAGCTTTAGTCAGGAATGTCTTGTTGGTGAAGGTTCTCTTGGTCGTGTTTACAGAGCAGAGTTTCCTAATGGAAAGATTCTGGCCATTAAGAAGATCGACAGTGCGGCACTTTCATTACAGGAGGAAGATAATTTTCTCGAAGCTGTTTCAAACATGTCACGCCTGAGGCACCAAAACATCATTCCACTGGTAGGGTATTGTGCTGAACATGGGCAGCGCCTTCTGGTTTATGAGTTTGTTGGAAATGGAACTCTGCATGATATGTTACATTTCACTGAGGATGGCAGCAAGACACTAACATGGAATGCTCGTGTTAGGGTAGCACTTGGCACTGCTAGAGCTCTAGAGTATTTGCATGAAGTTTGCCTGCCTTCTGTTGTACATAGAAACTTCAAGTCAGCAAACATTTTACTTGATGAAGAGCTTAACCCCCAGTTGTCAGACTGTGGACTCGCTGCACTAACACCGAATACTGAACGACAGGTTTCAACTCAAATGGTTGGTTCGTTTGGTTACAGTGCTCCTGAATTTGCCATGTCTGGAATTTACACTGTAAAAAGTGATGTTTATAGCTTCGGAGTAGTGATGCTAGAGCTGTTAACAGGTCGGAAGCCCCTGGACAGCTCAAGGGTAAGATTGGAACAGTCTCTTGTCAGATGGGCTACTCCCCAGCTTCATGATATTGATGCATTAGCTAAAATGGTTGATCCTGCACTAAATGGCATATACCCTGCAAAGTCTCTTTCCCGTTTTGCTGACATCATTGCACTATGCGTTCAGCCAGAGCCAGAGTTTCGGCCTCCCATGTCTGAAGTTGTGCAAGCACTGGTTCGGTTAATGCAAAGGGCAAGCATGGTAAGGCGTTCGAGTGATGAATCAGGATTCGCCTACAAGGTTCCGGATCACGAAGCAGCTGACTTTTCCTTCTAA 2196 0.4467 MAQSRPTSPFFATFIAAVLSSAILLTPSLVLASTDPSDFQALQVVFSSLNNPPQLTGWKPTGGDPCGESWKGVTCEGSAVIAIQVPGLGLSGTMGYLLSNFLSLRTLDLSNNNIHDSIPYQLPPNLTSLNLASNNLSGNLPYSISTMVSLIYLNVSRNAFSQSIGDIFANLQGLSALDLSYNNFSGDLPNSISSVSNLSSLYLQSNQLTGSVNVLADLPLTDLNIANNNFSGWIPQEFNSIPNLIYDGNSFTNGPAPPPPPYTSPPPSRPRNTRKRTEPHTNTTRGSDGQGSHSDHQINKKGLTAGHIVGVVLGSIAVVLCAMLALVFCLRKFSKGKRAKDNNARASLGTLSVGADKVVNTEMQEQRVKSMAAVTDLKPPPTEIFIGERIHGKNGSGFSGMRPKAPITATTYTVASLQTATNSFSQECLVGEGSLGRVYRAEFPNGKILAIKKIDSAALSLQEEDNFLEAVSNMSRLRHQNIIPLVGYCAEHGQRLLVYEFVGNGTLHDMLHFTEDGSKTLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPQLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFAMSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRLEQSLVRWATPQLHDIDALAKMVDPALNGIYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLMQRASMVRRSSDESGFAYKVPDHEAADFSF* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00407 731 ProSiteProfiles Leucine-rich repeat profile. 103 124 IPR001611 GO:0005515
Eupl06g00407 731 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Eupl06g00407 731 MobiDBLite consensus disorder prediction 283 298 - -
Eupl06g00407 731 MobiDBLite consensus disorder prediction 253 268 - -
Eupl06g00407 731 SUPERFAMILY Protein kinase-like (PK-like) 406 698 IPR011009 -
Eupl06g00407 731 SUPERFAMILY L domain-like 34 246 - -
Eupl06g00407 731 Pfam Leucine rich repeat 153 208 IPR001611 GO:0005515
Eupl06g00407 731 ProSiteProfiles Protein kinase domain profile. 424 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00407 731 Gene3D Phosphorylase Kinase; domain 1 400 501 - -
Eupl06g00407 731 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 161 IPR046959 -
Eupl06g00407 731 Gene3D Transferase(Phosphotransferase) domain 1 502 721 - -
Eupl06g00407 731 Gene3D Ribonuclease Inhibitor 35 259 IPR032675 -
Eupl06g00407 731 MobiDBLite consensus disorder prediction 249 298 - -
Eupl06g00407 731 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 502 712 - -
Eupl06g00407 731 CDD STKc_IRAK 430 701 - -
Eupl06g00407 731 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 35 262 - -
Eupl06g00407 731 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 392 501 - -
Eupl06g00407 731 Pfam Protein tyrosine and serine/threonine kinase 429 698 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00407 Eupl-Chr6 6094034 6106156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00407 147 731 Strubbelig Receptor Gene Family AT4G22130 68.143 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Eupl06g00407 PK_Tyr_Ser-Thr 3.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00407 - - nnu:104594077 1053.89