Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00400 ATGCATGTCTCTATCCAAAACAAGCATTCCATCCACGTCTGGGTTTCTCTTCACAATCTCTGCCAGATCCACTATCGTAAATCATGCCTTTGTCATCCGCCCTCTCAAACGGCAGCGTCACCGTGGGACGAACCTCCTTCGAACGACAAGGTCAAACTCATGTGCAACTATGGTGGGAAGATCCACCACAGACCTTACGATAACCAATTCGCGTATGTCGGAGGTGATACAAAGATCTTGGCTGTCGATCGCAGCATCAGATTCTCCAACAACATCAGTGAACTCTCTTCTCTCTGCGACGAAAATGTTTGGTTCAACTATCAGTTAGCAGGAGAAGACCTGGACGCTCTGGTCTCTGTAGCCAACGACGAAGATCTCGAGCACATGATGTTAGAATACGGCCGTCTCCACCGTGCCTCAAAGCCTGCGAGACTCCGGCTCTTTCTCTTCCCTCTAAACCCTACGATCCCGACGTGCTTTGTTACCAATGAACCGAAAAACAATCAACAATGGTTCGTGGATGCTCTGAATTCGGTTCTCATTTAG 546 0.4853 MHVSIQNKHSIHVWVSLHNLCQIHYRKSCLCHPPSQTAASPWDEPPSNDKVKLMCNYGGKIHHRPYDNQFAYVGGDTKILAVDRSIRFSNNISELSSLCDENVWFNYQLAGEDLDALVSVANDEDLEHMMLEYGRLHRASKPARLRLFLFPLNPTIPTCFVTNEPKNNQQWFVDALNSVLI* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00400 181 CDD PB1_UP2 54 150 - -
Eupl06g00400 181 SMART PB1_new 65 152 IPR000270 GO:0005515
Eupl06g00400 181 Gene3D - 70 151 - -
Eupl06g00400 181 SUPERFAMILY CAD & PB1 domains 67 154 - -
Eupl06g00400 181 PANTHER OS05G0427100 PROTEIN-RELATED 44 178 - -
Eupl06g00400 181 Pfam PB1 domain 66 151 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00400 Eupl-Chr6 6002782 6003837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00400 43 180 MAP Kinase Kinase Kinase AT5G57610 39.286 1.17e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00400 - - mof:131161682 207.608