Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00390 ATGTCCTCAGATCTACATCAAGAATTATCACCTTCAGATGTCGTTCTGGATGATAACAGCATCCCTGGCAGTTTACTCGCCACTGATGTTGAAACAGGTCCCAGTGAGGACATAACTCTGACAGATACTTATACAAGAAGGGAGGTCTGTGCATCTGAAGAGTATGCAGGACTAGAACCATATGTGGGCATGGAATTTAAATCTGAGCAGGAGGCGGGGATCTTCTATGATGAGTATGCTAGTCATAAGGGTTTCAGCATCCGAAAGGATTCACTCAAACGTTCAATGCGTGACAAATCTGTCACTGCTCGTCTCTTTGTGTGCTCAAAAGAGGGTTTTCGCCGTGCAACAGCTGATGTGAACAAAGAAGGCAATGTTAAGAGACGCAAAGCAGTCACAAGGGTAGGCTGCAAGGCACATATGTGGGTGAAGAGAAGATCTCCAGGGTTATGGGTGGTGAGATCATTTGAGCAGGACCATAATCATGAGCTAATAACTCTAGAGAAATTGAGTTTCCTTCGATCCAGACAGAACATATATTTTGCAACCAAAGAATATACAAGGCAGGGAGGAGTAGGCTCTATTACAGTTCAGAGCTTGTTGACAGAAGAAACTCAAGGTACTGCAAGTGCTGGCTCTGTAGAGGAAGACTCGGAAGATTATGTTGTTGGTAAAAGGAGAAACCTCGGATCAGATGCCCAAATTGTCTTTGATTATTTCAAGCGCAAGCAGGACAAGAACCGGAACTTCTACTATGCAGTTCAACTCGATCATGAACAGAATATGCGTAATGCCTTCTGGGTCGAGGCAAGGTCTAGGATGGCTTACAGTTACTTCGGTGATGTGGTCAGCTTTGACCTGAATTGTAAGACAAATGAATATGGAGTTCCCTTTGCCACCCTTATCGGGGTTAACCATCATCAGCAGACAGTGTTGTTTGGTTCTGCTTTACTAGCGGATATATCCACACCAACTCTTGTGTGGCTCTTCCAGACATGGCTTACAGCAATGTCAGGTCGCCATCCAAAAGTAATAATTACTGACCAACATATGGCGATGGAATCAGCAATTTCACAAGTTCTCCCGATGACCCAACATTGTTTATGCAAGTGGCAAATTCTAGATGAGGCCTTTGAAAAGTTGAAGCAAGTTTTTTGTGCACACAGTACATTCAATGAGGAATTCCAGAACTGTATAGACTTCTCTGAGACAGCTGAAGAGTTTGAATCAAGATGGAGTTCGCTCCTCAATAGATATGCACTCAGGGAAAGTAAATGGCTTCAAAAGCTGTACGAAGTTCGTCAGAAATGGGTCCCCGTGTTCTTACGGGACACGTTTGTTGCAGGGATGACTAGTAATCCTAAAAGCGAAACCAAGAACCCCTTCTTTAATTGGTCTCTCTCCTCCAAGACCAAATTGGAGGAGTTCATTATGCACTACGAAAAGGCTTTAGCAGATCATTATGAAAAGGAGGCTGAAGAGGATTACAAATCAATTTACACCGCACCCGCTTTAAAGACATCGACAACAATGGAAAAGCAAGCAGCAGCTACTTATACAAGGAAAATGTTCTCAAAATTCCAAGAAGAATTATTCGAAGCTTTTGAACAAGTGGTAACTAAAACTGAGGAGGATGGGTTAGTCACAGTGTATAAGGTTGCGAGGTTCGGTGCAGAAGAGAAGAAGTACACAGTTGCGCTAAATGCTTCTGAAGTGAGAGCAAGTTGCAGTTGCCAGATGTTCGAGTTTTTGGGGATGCCTTGCAGACATGCATTGATAGTACTGAGACAGGCAAATGTGTTTATGCTCCCCTCTCATTACATCTTGAAGCGATGGACAAGAAACGCTAAGGATTGGATTGTGCTGGATGAACAAGGTGAAGGAATGCAAAGTGATTGTCCAGATTCCCTGACCTTGCGATACCAAAATTTGTGTCAGGAAGCCATGAAATATGCAGATGTGGCAGCCATATGCAAAGAAGTTTACAATGTGGCAATGGATGTTCTACGTCAAGGTTTGAAAAAGGTTGTTTCTGTGGCAAAGGATTATGAGACACGGGTTCATCTTGGAACCCCAGTTAGTGGTCATCATCAAGGAGATAGTGTGAACAGAGGAACTGGTTCCTGCATATGA 2133 0.4337 MSSDLHQELSPSDVVLDDNSIPGSLLATDVETGPSEDITLTDTYTRREVCASEEYAGLEPYVGMEFKSEQEAGIFYDEYASHKGFSIRKDSLKRSMRDKSVTARLFVCSKEGFRRATADVNKEGNVKRRKAVTRVGCKAHMWVKRRSPGLWVVRSFEQDHNHELITLEKLSFLRSRQNIYFATKEYTRQGGVGSITVQSLLTEETQGTASAGSVEEDSEDYVVGKRRNLGSDAQIVFDYFKRKQDKNRNFYYAVQLDHEQNMRNAFWVEARSRMAYSYFGDVVSFDLNCKTNEYGVPFATLIGVNHHQQTVLFGSALLADISTPTLVWLFQTWLTAMSGRHPKVIITDQHMAMESAISQVLPMTQHCLCKWQILDEAFEKLKQVFCAHSTFNEEFQNCIDFSETAEEFESRWSSLLNRYALRESKWLQKLYEVRQKWVPVFLRDTFVAGMTSNPKSETKNPFFNWSLSSKTKLEEFIMHYEKALADHYEKEAEEDYKSIYTAPALKTSTTMEKQAAATYTRKMFSKFQEELFEAFEQVVTKTEEDGLVTVYKVARFGAEEKKYTVALNASEVRASCSCQMFEFLGMPCRHALIVLRQANVFMLPSHYILKRWTRNAKDWIVLDEQGEGMQSDCPDSLTLRYQNLCQEAMKYADVAAICKEVYNVAMDVLRQGLKKVVSVAKDYETRVHLGTPVSGHHQGDSVNRGTGSCI* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00390 710 SMART 26again6 574 601 IPR006564 GO:0008270
Eupl06g00390 710 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 53 677 IPR031052 GO:0006355
Eupl06g00390 710 Pfam SWIM zinc finger 563 598 IPR007527 GO:0008270
Eupl06g00390 710 ProSiteProfiles Zinc finger SWIM-type profile. 563 599 IPR007527 GO:0008270
Eupl06g00390 710 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Eupl06g00390 710 Pfam MULE transposase domain 282 374 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00390 Eupl-Chr6 5842802 5847947 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl06g00390 MULE 1.3e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00390 - - nnu:104603833 619.387