Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00378 ATGCATCCACCGTCACCGTCACCGTCACCGCCACCCCCAACCCAAACCCTTAACCTCATCCACCATGTTCTCCCTCTCCTCATCCTCTCCTCCCTCACCGTTAAATCCTTCATCGGACGGTGGCAAGTCATCCGCTCCAAACTCAATCACCTGCAATCCTCCCTCGCCGAAATCACCAACTCTCCTCACTGGTCCGAAAACCCTCTCTTACAAGACCTCCTCTCTAATCTCTTGTCTACTCTACACAAAACTCAATCCCTCTGTCAACAATGCAAGACCAACCCTTCTTCCTACACAGGCGGAAAGCTCCTCATGCAGAGCGACATCGATATGGCCTCCGCATCCCTCTCCGCTCATCTCCACGACATCGATTTACTGCTCAAATCGGGCGTTCTACGACAATCCAACGCGATTGTTCTATCGCAACCTGGTCCCGGATCAGGTAAAGAAGAGGTAGGGTTTTATATCAAAGACCTCTTCGCGAGGCTCCAGATCGGAGGTATTGAGTTCAAGAAGAAGGCTTTGGATTCTCTGCTCAAGCTCCTCAGAGAGGATGATAAGGCTGCGGTTCTGGCGGCAAAAGAAGGAAATGTGGGCTATTTGATTCATTTGCTTGATTCGAATAACAACCCTTCAGTTCGAGAGCAAGCTGTGGTTGCGGTCTCTGCTCTTGCTAGCGCTAGCGATTCATCGAGGAATTGCGTCTTCGAAGAAGGGGGTTTAGGTCCTCTGTTGCGACTACTGGAATCTGGATCGTCGGGGTTTAAGGAAAAGGCGGCGATGGCGGTAGAAGCGATCACAGCCGATCCGGAGAACGCTTGGGCGATTTCGGCTTATGGTGGGGTCTCGGTTTTGATAGATGCCTGTCGATCGGGATCACCGGTGACGCAGACCCATGCAGCCGGAGCAATAAAGAATGTGGCCGCGGTGGAGGATATCAGGGTGACATTGGCGCAAGAAGGCGCGGTGGCGGTTTTAGTCCAGCTGTTGATGTCCGGCACTGGCCCTGCTCGAGAAAAGGCGGCAAATGGTCTTTCGATCCTCGCATCAGCCGGCGAGGATTTCAGGGTTTCGATAGTACAGGAAGGAGGATTGCAGAGTCTCCTCCAATTGCTTCAAGAGTCTTCGGATTCAGATACATTAGATTTAGAACACGTTCTGCGAACCATTAACGCCCTCTCGGGAACAGCTTCAACGGCGAGGATCTTATCTTCTTCAACTTCGTTTGTATTACAGCTCTCCGAGCTGATCAAGCATGGAACCATCACCGTTAAGCAGATTTCGGCATCGATACTCTGTAATCTATCAATGAGCGATGCGAACAAGCGCGATATTGCCGGGTGCATGGGAGCTCTAGTGAAAATGGTAGAGTCATCGAAGCCGGTGGGGATGCAGGAGGTGGCAGCGCAAGCGCTGGTTTCTTTATTGACCGTCCGATCGAATCAGAAAGATCTTGTTAGGGATGAGAAGAGTGTATCGAAGTTGGTTCAGATGTTGGATTCTAAGAATGAATTGGTTTGTAAGAAGTTTCCGGTGTCAGTAATCTCAGCGATCGTCGCCGGAGGTAGCAACGGGTGTCGAAAGAAGATTATCGCAGCCGGATCTTACCCACATTTACAGAAGCTGGCGGAAATTGACGTCGCCGGAGCTAAGAAGGCGTTACAGAGACTCGCTGGAAATCGTCTCAAGAACATCTTCAGCAGGACTTGGAAGGAATAA 1719 0.509 MHPPSPSPSPPPPTQTLNLIHHVLPLLILSSLTVKSFIGRWQVIRSKLNHLQSSLAEITNSPHWSENPLLQDLLSNLLSTLHKTQSLCQQCKTNPSSYTGGKLLMQSDIDMASASLSAHLHDIDLLLKSGVLRQSNAIVLSQPGPGSGKEEVGFYIKDLFARLQIGGIEFKKKALDSLLKLLREDDKAAVLAAKEGNVGYLIHLLDSNNNPSVREQAVVAVSALASASDSSRNCVFEEGGLGPLLRLLESGSSGFKEKAAMAVEAITADPENAWAISAYGGVSVLIDACRSGSPVTQTHAAGAIKNVAAVEDIRVTLAQEGAVAVLVQLLMSGTGPAREKAANGLSILASAGEDFRVSIVQEGGLQSLLQLLQESSDSDTLDLEHVLRTINALSGTASTARILSSSTSFVLQLSELIKHGTITVKQISASILCNLSMSDANKRDIAGCMGALVKMVESSKPVGMQEVAAQALVSLLTVRSNQKDLVRDEKSVSKLVQMLDSKNELVCKKFPVSVISAIVAGGSNGCRKKIIAAGSYPHLQKLAEIDVAGAKKALQRLAGNRLKNIFSRTWKE* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00378 572 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 11 569 - -
Eupl06g00378 572 SUPERFAMILY ARM repeat 157 546 IPR016024 -
Eupl06g00378 572 Gene3D - 404 557 IPR011989 -
Eupl06g00378 572 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 239 281 IPR000225 GO:0005515
Eupl06g00378 572 SMART arm_5 310 350 IPR000225 GO:0005515
Eupl06g00378 572 SMART arm_5 352 398 IPR000225 GO:0005515
Eupl06g00378 572 SMART arm_5 185 226 IPR000225 GO:0005515
Eupl06g00378 572 SMART arm_5 479 520 IPR000225 GO:0005515
Eupl06g00378 572 SMART arm_5 269 309 IPR000225 GO:0005515
Eupl06g00378 572 SMART arm_5 228 268 IPR000225 GO:0005515
Eupl06g00378 572 Gene3D - 155 400 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00378 Eupl-Chr6 5706715 5709909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00378 282 557 U-box Gene Family AT2G23140 24.199 5.17e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00378 - - nnu:104606500 764.222