Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00371 ATGAAAGTAGAGAAGGTCGTAAGAGAGATGGGGAGACCGGTTGTAGAAGTTACAGAGGAGGAGGAGGAGGAGGTGGTGGTGGTGCTGACGCTGTCGCCGGAGATGACCATTCCGGCGTGCGTAGGAGAAGAGGCGGAGAGAGACGGAGAAGAGCTGTTCGTACCGCCTCTGAACTTTGCCATGGTTGATAATGGCGTATTCAGGTCTGGTTTCCCTGATACCGCCAACTTCACCTTCATACAAACCCTCGGTCTTCGCTCCGTCTTATATCTTTGTCCAGAACCGTATCCGGAGGCCAACACTGAATTTCTTAAGTCGAACGGGATTCAGCTTTTTCAGCTTGGGATCGATGGATGTAAGGAACCTTTTGTGAACATTCCAGAGGATACAATTCGTGAGGCACTCAAAGTTGTCCTTGATGTTAGGAACCACCCACTTTTAATTCATTGCAAACGAGGAAAGCATCGGACAGGTTGTGTGGTTGGATGCTTAAGAAAATTGCAAAGATGGTGTCTGTCTTCGGTGTTTGATGAGTACCAGCGGTTTGCTGCTGCCAAAGCTAGGGTTTCAGATCAGAGGTTTATGGAGAAGTTTGATGTTTCCAGCTTGAAACACTTGTCAACTTCATTCTACTGGTCGAAGAGGATGTAG 651 0.4793 MKVEKVVREMGRPVVEVTEEEEEEVVVVLTLSPEMTIPACVGEEAERDGEELFVPPLNFAMVDNGVFRSGFPDTANFTFIQTLGLRSVLYLCPEPYPEANTEFLKSNGIQLFQLGIDGCKEPFVNIPEDTIREALKVVLDVRNHPLLIHCKRGKHRTGCVVGCLRKLQRWCLSSVFDEYQRFAAAKARVSDQRFMEKFDVSSLKHLSTSFYWSKRM* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00371 216 Gene3D Protein tyrosine phosphatase superfamily 52 202 IPR029021 -
Eupl06g00371 216 PANTHER TYROSINE-PROTEIN PHOSPHATASE 47 204 - -
Eupl06g00371 216 CDD PFA-DSP_Siw14 52 199 - -
Eupl06g00371 216 ProSiteProfiles Dual specificity protein phosphatase domain profile. 58 212 IPR020422 GO:0006470|GO:0008138
Eupl06g00371 216 FunFam probable tyrosine-protein phosphatase At1g05000 52 202 - -
Eupl06g00371 216 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Eupl06g00371 216 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 199 IPR029021 -
Eupl06g00371 216 Pfam Tyrosine phosphatase family 54 206 IPR004861 -
Eupl06g00371 216 PRINTS Plant and fungal dual specificity phosphatase signature 126 140 IPR020428 GO:0016791
Eupl06g00371 216 PRINTS Plant and fungal dual specificity phosphatase signature 109 123 IPR020428 GO:0016791
Eupl06g00371 216 PRINTS Plant and fungal dual specificity phosphatase signature 90 103 IPR020428 GO:0016791
Eupl06g00371 216 PRINTS Plant and fungal dual specificity phosphatase signature 53 70 IPR020428 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00371 Eupl-Chr6 5636217 5642782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00371 36 215 Protein tyrosine phosphatase (PTP) family AT4G03960 71.111 2.47e-99 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00371 K18045 - vvi:100251662 326.635