Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00369 ATGGAGGAAACAGGGATTGAGGAAATAGGAGGAACTTTGCCTTTGCTTCCCTCACCCCACAATATACCATCAGAAGTTAAGCCAGAGCAAGTTGAGCCTCCGAAGCGTTTGGCGATCAATAGGCGTGGTTTTGGAAGTGACGGGCGGAGCATATCATTGCTTACTAACCACTTCAAAGTTTCGTTTAATGTTCCGGATGAGAACTTTTATCAGTACAGTGTTTCTATTACTTCTGTAGATAAACGAGTTGTTGAAGGCAAGGGGATTGGGAGAAAAGTTATGGATAAACTATACCAAACTTATTGTTCTGAGCTTGCAGGGAAGCATTTTGCTTATGACGGAGAGAAAAGCTTGTTCACAGTGGGTCCTCTTCCACAAAACAAATTTGAGTTCACAGTGGTTTTGGAGGATTCGTGTGTCAAACGTAATGGGAGCCCTAGTGTGAGTGGGAGCCCTAGTGAGATTGACCGTAAGCGATCGAAGCGTTCTTTTCAATCAAAGACTTTTGAGGTACAAATCAGCTTTGCTGTTAAAATTCCAATGAGGCCCATTGCTTTAGCTCTCCAGGGAAACGAGGCAGAGAGCACTGAAGATGCATTGAGAGTGCTTGATATTATATTGAGGCAGCAAGCGGCTAAGAGGGGATGCCTTCTTGTCAGACAATCCTTTTTCCACGATGATGTGAGGAACTTCGTTGATGTAGGTGGGGGAGTTTCTGGTTGCCGAGGTTTCCATTCAAGCTTCCGCACCACTCAGGGTGGTTTGTCATTGAATATGGATGTGTCTACAACAATGATCTTGACTCCTGGTCCTGTGCTGGACTTCTTACTTGCCAACCAGAATGCCAGAGATCCTCGCCAGATTGATTGGGGAAGGGCCAGAAAAATGCTGAAGAACATGAGGATTAAGACGAGGCACAACAATATGGAATTTAAGATCATAGGACTCAGTGAAAATCCTTGCAACATGCAATACTTCCCCATGAAAGTGAAAAATGGAGATGGTGGCAATGATGAGGGCCAAACTTTTGAGATTACTGTATATGATTATTTTGTCAAGAATCGTAAGATAGAGCTGTCTTATTCTGCATATATGCCCTGTCTTGATGTCGGCAAACCAAAGCGTCCCAATTATCTTCCACTGGAGCTCTGTGTATTAGTGTCACTGCAACGTTATACAAAGGCATTATCTACTATGCAGAGATCTTCCTTAGTAGAAAAATCGAGGCAAAAGCCTCAGGAACGTATAACGACTGTGACCGATGCTGCCAGAAATTACCGTTATGATGAAGATCCAATGCTGTCTGCTTGTGGTATTTCCATTGACAAACAGTTGACTCAAGTTGATGGTCGTGTTCTTAATGCACCAACGTTGAAGGTTGGTAATACTGAAGACTGCATTCCTCGCAATGGGCGATGGAATTTCAATAACAAGAGACTTTTCACACCCATTCAAATTAAACGTTGGGCTGTTGTCAACTTTTCTGCTCGTTGTGATACCAGCCATCTTTCTCGGGAGCTTATTAACTGTGGAAGAAATAAAGGAATTCATATTGAGCGGCCACATGCATTGATTGAGGAAGATCCTCAGTGTAGGAGATCTGGTCCTGTTGCAAGAGTTGAAAATATGTTTGAACAGATAAGGTCAAAGCTCCCTGGTCCTCCTGAATTTCTTCTATGTGTCTTGCCAGAGCGGAAAAATTGTGATATTTACGGACCTTGGAAGAAGAAAAACCTTCACGAAATGGGTATCTTCACACAGTGCATCTCACCTATGAAGATCAATGACCAGTACCTTACGAATGTACTTTTGAAAATCAATTCCAAGCTTGGCGGTACTAATTCTTTATTGGCGATTGAGCACTTGCCATGTATTCCACTTGTAAAAGAAACTCCAACTTTGATCTTGGGAATGGATGTTTCTCATGGCTCTCCCGGTCAATCAGATATCCCATCTATAGCCGCGGTTGTTGGTTCTAGATCATGGCCCTTGATTTCAAGGTACAGAGCATCGGTACGAACACAATCAGCAAAGATGGAGATGATCAACTCTTTGTACAAACCACTAGCTAATGGGGAAGATGATGGCATTATTAGAGAGCTACTTGTGGATTTCTATCAGACAAGTAATGCACGCAAGCCGACCCAAATCATTATCTTTAGGGACGGAGTGAGCGAATCACAATTTAATCAAGTTTTGAACATTGAGCTGGAGCAAATTATAAAGGCGTTTCAACACTTAGGCGAGAATTGGCTACCGAAGTTCACATTGATTGTGGCTCAAAAGAACCACCACACAAAGCTATTCCAAGCCGGAGGGCCTGATAATGTTCCACCTGGAACGGTGGTTGATACAAAACTCGTGCATCCAAGAAATTATGATTTTTACATGTGTGCTCATGCAGGAATGATTGGAACATCTCGCCCAACACACTACCATGTCTTGCTCGATGAGATTGGTTTTTCAGCTGACGATCTGCAAAAGTTTGTTCACTCACTCTCGTATGTGTACCAGCGTAGCACGACTGCGATCTCCATTGTGGCGCCGATCTGCTACGCACACCTTGCTGCTCAACAGATGGGGCAGTTCATTAAGTTTGAAGATTTCTCAGATTCGTCTTCTAGTCATGGAGGTGTCACAGTGGCAGGGAGTGTGCCTGTTCCAGAGCTCCCCAGGCTGCATGATAAAGTTAAGAGTTCTATGTTCTTTTGTTGA 2715 0.4339 MEETGIEEIGGTLPLLPSPHNIPSEVKPEQVEPPKRLAINRRGFGSDGRSISLLTNHFKVSFNVPDENFYQYSVSITSVDKRVVEGKGIGRKVMDKLYQTYCSELAGKHFAYDGEKSLFTVGPLPQNKFEFTVVLEDSCVKRNGSPSVSGSPSEIDRKRSKRSFQSKTFEVQISFAVKIPMRPIALALQGNEAESTEDALRVLDIILRQQAAKRGCLLVRQSFFHDDVRNFVDVGGGVSGCRGFHSSFRTTQGGLSLNMDVSTTMILTPGPVLDFLLANQNARDPRQIDWGRARKMLKNMRIKTRHNNMEFKIIGLSENPCNMQYFPMKVKNGDGGNDEGQTFEITVYDYFVKNRKIELSYSAYMPCLDVGKPKRPNYLPLELCVLVSLQRYTKALSTMQRSSLVEKSRQKPQERITTVTDAARNYRYDEDPMLSACGISIDKQLTQVDGRVLNAPTLKVGNTEDCIPRNGRWNFNNKRLFTPIQIKRWAVVNFSARCDTSHLSRELINCGRNKGIHIERPHALIEEDPQCRRSGPVARVENMFEQIRSKLPGPPEFLLCVLPERKNCDIYGPWKKKNLHEMGIFTQCISPMKINDQYLTNVLLKINSKLGGTNSLLAIEHLPCIPLVKETPTLILGMDVSHGSPGQSDIPSIAAVVGSRSWPLISRYRASVRTQSAKMEMINSLYKPLANGEDDGIIRELLVDFYQTSNARKPTQIIIFRDGVSESQFNQVLNIELEQIIKAFQHLGENWLPKFTLIVAQKNHHTKLFQAGGPDNVPPGTVVDTKLVHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSADDLQKFVHSLSYVYQRSTTAISIVAPICYAHLAAQQMGQFIKFEDFSDSSSSHGGVTVAGSVPVPELPRLHDKVKSSMFFC* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00369 904 Gene3D paz domain 263 392 - -
Eupl06g00369 904 MobiDBLite consensus disorder prediction 142 161 - -
Eupl06g00369 904 SUPERFAMILY Ribonuclease H-like 541 863 IPR012337 -
Eupl06g00369 904 FunFam Protein argonaute 3 625 904 - -
Eupl06g00369 904 Pfam Piwi domain 558 865 IPR003165 GO:0003676
Eupl06g00369 904 SMART Piwi_a_2 557 865 IPR003165 GO:0003676
Eupl06g00369 904 Pfam PAZ domain 273 404 IPR003100 GO:0005515
Eupl06g00369 904 ProSiteProfiles Piwi domain profile. 557 865 IPR003165 GO:0003676
Eupl06g00369 904 FunFam Protein argonaute 7 264 392 - -
Eupl06g00369 904 MobiDBLite consensus disorder prediction 1 31 - -
Eupl06g00369 904 SUPERFAMILY PAZ domain 264 428 IPR036085 GO:0005515
Eupl06g00369 904 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 34 867 - -
Eupl06g00369 904 SMART PAZ_2_a_3 270 413 IPR003100 GO:0005515
Eupl06g00369 904 Pfam Argonaute linker 2 domain 414 459 IPR032472 -
Eupl06g00369 904 Pfam Argonaute linker 1 domain 219 266 IPR014811 -
Eupl06g00369 904 CDD PAZ_argonaute_like 269 387 - -
Eupl06g00369 904 CDD Piwi_ago-like 432 857 IPR045246 -
Eupl06g00369 904 Gene3D - 624 904 IPR036397 GO:0003676
Eupl06g00369 904 ProSiteProfiles PAZ domain profile. 297 388 IPR003100 GO:0005515
Eupl06g00369 904 Gene3D - 452 618 - -
Eupl06g00369 904 Pfam N-terminal domain of argonaute 49 207 IPR032474 -
Eupl06g00369 904 SMART DUF1785_2 217 269 IPR014811 -
Eupl06g00369 904 Pfam Mid domain of argonaute 468 548 IPR032473 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00369 Eupl-Chr6 5592314 5601922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00369 41 904 Eukaryotic Initiation Factors Gene Family AT5G43810 35.889 4.48e-166 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00369 K11593 - ming:122069664 1505.73