Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00367 ATGCGGAGAGGGAGAGGAACTGCAGCCGTGGCGGCGGCGACGGCAACAGCGGCAGCGGTGGAAGGTGCGATCGGAGGATCAGGATCGAGGAATCTAGTGAAAGAGACGAGATTTAGAGGTGTACGGAAGAGACCGTGGGGGAGATTCGCTGCAGAGATCAGAGACCCTAGGAAGAAAACTCGTGTTTGGCTTGGCACTTTTGATTCGGCTGAAGATGCCGCGCGAGCTTACGATGCCGCTGCACGGACTCTCCGTGGTCCTAAGGCTAAGACCAATTTTCCTTTATCTCCACAGTCCTTTCCTCATCATTTAGCGTTTCAACAAAACCCTAACGATTATAATCAACGATTGCATCAACAACAACAACACCAAGTTCAGAGGCCGACGACGAGCAGTTTAAGCAGCACCGTCGAGTCTTTCAGCGGTCCTAAGTTCTCGTCGGTGGCGCCGGTTGTGGTGCCAACCAGACGACGCCAACGCCAACACCCACCACCTCCTCAGGCCATTCCCGACGGTTGTCATAGCGATTGCGATTCATCCTCTTCGGTTATTGATGGAGATATCGCCTCATCGTTCCGTAAACCTTTACCATTCGATCTTAACCTCCCACCGTTGGATGACGGCGATGTTGCTGGTGATGATTTCCAGAGCACGGCTTTATGCCTCTGA 669 0.5306 MRRGRGTAAVAAATATAAAVEGAIGGSGSRNLVKETRFRGVRKRPWGRFAAEIRDPRKKTRVWLGTFDSAEDAARAYDAAARTLRGPKAKTNFPLSPQSFPHHLAFQQNPNDYNQRLHQQQQHQVQRPTTSSLSSTVESFSGPKFSSVAPVVVPTRRRQRQHPPPPQAIPDGCHSDCDSSSSVIDGDIASSFRKPLPFDLNLPPLDDGDVAGDDFQSTALCL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00367 222 Pfam AP2 domain 36 86 IPR001471 GO:0003700|GO:0006355
Eupl06g00367 222 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 29 185 - -
Eupl06g00367 222 Gene3D AP2/ERF domain 36 96 IPR036955 GO:0003700|GO:0006355
Eupl06g00367 222 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Eupl06g00367 222 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Eupl06g00367 222 SUPERFAMILY DNA-binding domain 37 96 IPR016177 GO:0003677
Eupl06g00367 222 MobiDBLite consensus disorder prediction 116 143 - -
Eupl06g00367 222 CDD AP2 36 96 IPR001471 GO:0003700|GO:0006355
Eupl06g00367 222 MobiDBLite consensus disorder prediction 116 181 - -
Eupl06g00367 222 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Eupl06g00367 222 FunFam Ethylene-responsive transcription factor 2 36 95 - -
Eupl06g00367 222 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00367 Eupl-Chr6 5573031 5574809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00367 1 222 AP2-EREBP Transcription Factor Family AT1G50640 52.321 6.23e-51 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl06g00367 AP2 4.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00367 K09286 - nnu:104594121 244.202