Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00311 ATGTCGAACCGACAGTCATGGACCATCGATCCTGATTTGGACGGTATCGATCTCGATCCCGAAGACTTCAATGCCTCAGTCCCTCTCAAGAAAGTTCCAGCCGGCGATGTCTTCGAAGCTTCGAGAGCTGGAGATGTTGAGAGGCTTCGGTATCTACTCGAATCAGGGGTGAACGTAAATGCGAGAGACCAATGGGATTCTGTTGCTCTGTATTACGCGTGCTTGGCGGGCCATCTCGATGCAGCTCGGATGCTTCTCGAGAGCGGAGCGATCTGTTCGGAGCACACGTTCGATGGTGATCGGTGCCATTATGCTGCTTTGAATCTTAAAGTAAGGAAATTGCTTAAGGCTTTTGAAGCTCGACCACCGCCTTTGGGACCGTTGCAGGCGGCGTTGAGGGATACGTTCTTGGGGTGCAGAGCGAACCAGGTTTATCTCGAACAGTCAGATAGTTCTATCCAAATTCCAGGTCCTTCATCAAATGGATCAAATTCCAACCACTTTCCTCCAGACGTGGTATTTTTTGTGCAAGGCAGACCCATTGAAGCTCACAGGATCATCTTAAGTGCTCGGTCACCTTTTTTTAAGAGGAAATTTGAGACAGATTGGAAAGATCGCACAGAAGTGAGTTTCTCGAGGAATAAATTATCTTATCCTGCCCTTTACAGCCTTATCAATTTCTTCTATTCCGACAGACTCGAGGTTGCAGTGGATGACATGGAAGATCTTGTGCGAATTTGCAAAGTCTGCAAGTGTGAAGGATTACAGAGGGTCCTCGAGAAAGAATTAATTCACCAAAAATATGTGGAGTATAAAGCATTGAGAGATTTGGATAACTCTCAGAAACGCTTTATCTTACAGGGCTTGTCCCTTCCAGAGCAAGACCGGCTTCCTGCTGCCTTGCACCAGATCCTTCAAGTTTCCCTTGCCAAGTCCAACATGGAAGAAAACCTAGATAATAGTGCTGATACATTAGTATCCAATTTTGGTGCGATACAGATGAGTGAATCTTGGGATGATCTGGCAGATGTCTGCATAAGAGTTGACAAAAAGATTTTTCGTTGTCATCAGGTGATTTTGGCATCACGGTCAGAGTACTTTAAAGCAAGGTTATCTCATATGACGGACTTTCTTCAAGGGAAAGATGGTTTACCTGGTTATACTCTTCCACTTCTTGAAGAACTTGATTTAAGCACCGAGGCATTTAAAAAGATGATAGAGTATATGTACACTGATGGTTTGAAGGATATAGACCCAGATCAGGCAGAAGAAATGTTTGATGCTGCTTCAAGATATTTGTTGTTTCCTCTTAAGCGTGCTGTAGCTGATGCACTGTTGCCGCACCTGGAATTAGCCGGGCCTGCAGAGTTGTGCCACTGGCTGGTATTATCTGACATGTATGGCGTTCTGAAGATAAGGGAATACTGTCTAGATCTAATCGCTTGCAACTTTGAGACATTTGCCGACACACGTGAGTTCCGGGCAATGCTTCTGACGCTCCCACCACCCTCCGGAGATTCTTCGCTTCGCACCACTCTTCCAAGTGCTCCAGGAGCTGGTGTGAATGCCAACCAAGGAAATCTCCTTGATGACTTGCGAGAGAAATGGCTTGAGGCTGAAGCCGCGGAGCTTGACAAGAGAGATGAGAGTGCAGCTTTATTTGACAAGCGGCTGGAGATGCTTATGCTTATAGCAGAACGTGAATGTAGTGATGGTCAGCCTGACAGCTAG 1731 0.461 MSNRQSWTIDPDLDGIDLDPEDFNASVPLKKVPAGDVFEASRAGDVERLRYLLESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLGPLQAALRDTFLGCRANQVYLEQSDSSIQIPGPSSNGSNSNHFPPDVVFFVQGRPIEAHRIILSARSPFFKRKFETDWKDRTEVSFSRNKLSYPALYSLINFFYSDRLEVAVDDMEDLVRICKVCKCEGLQRVLEKELIHQKYVEYKALRDLDNSQKRFILQGLSLPEQDRLPAALHQILQVSLAKSNMEENLDNSADTLVSNFGAIQMSESWDDLADVCIRVDKKIFRCHQVILASRSEYFKARLSHMTDFLQGKDGLPGYTLPLLEELDLSTEAFKKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADALLPHLELAGPAELCHWLVLSDMYGVLKIREYCLDLIACNFETFADTREFRAMLLTLPPPSGDSSLRTTLPSAPGAGVNANQGNLLDDLREKWLEAEAAELDKRDESAALFDKRLEMLMLIAERECSDGQPDS* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00311 576 SUPERFAMILY POZ domain 165 265 IPR011333 -
Eupl06g00311 576 FunFam BTB/POZ domain-containing protein 164 286 - -
Eupl06g00311 576 Gene3D Potassium Channel Kv1.1; Chain A 163 264 IPR011333 -
Eupl06g00311 576 ProSiteProfiles BTB domain profile. 170 237 IPR000210 GO:0005515
Eupl06g00311 576 ProSiteProfiles BTB domain profile. 342 418 IPR000210 GO:0005515
Eupl06g00311 576 FunFam BTB/POZ domain-containing protein 31 154 - -
Eupl06g00311 576 Pfam Ankyrin repeats (many copies) 39 86 IPR002110 GO:0005515
Eupl06g00311 576 ProSiteProfiles Ankyrin repeat profile. 40 64 IPR002110 GO:0005515
Eupl06g00311 576 Pfam BTB/POZ domain 165 266 IPR000210 GO:0005515
Eupl06g00311 576 Pfam BTB/POZ domain 338 445 IPR000210 GO:0005515
Eupl06g00311 576 CDD BTB_POZ_ZBTB_KLHL-like 341 432 - -
Eupl06g00311 576 SMART BTB_4 342 449 IPR000210 GO:0005515
Eupl06g00311 576 SMART BTB_4 170 267 IPR000210 GO:0005515
Eupl06g00311 576 Gene3D Potassium Channel Kv1.1; Chain A 305 481 IPR011333 -
Eupl06g00311 576 SUPERFAMILY Ankyrin repeat 39 116 IPR036770 -
Eupl06g00311 576 Gene3D - 15 158 IPR036770 -
Eupl06g00311 576 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 9 565 IPR044515 -
Eupl06g00311 576 SUPERFAMILY POZ domain 338 448 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Eupl06g00311 BTB 6.4e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00311 K10520 - mof:131149142 969.148