Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00303 ATGTTTTTTTCAGTTTTTCCTCTTCCATCTTTACAAGGGTATACAGGATTAATGACGTCTTACCTTGTTGGAGGCCTTGTGAACGCCACAGATCATACCCATGTCGTTTCGATATCTGTATTCGTCGCTGTGCTTTGTTTGTGTATTGTTATTGGACACTTGTTCGAGGAGAATCGCTGGGTGAACGAGTCTATCACCGCTATCTTGATCGGATGCATCACTGGAACTATAATCTTGTTTTGGAGCAAGGGCACAAGTTCTCACATTCTAAGATTTGATGAGGAGGTGTTCTTCATATATCTCCTTCCACCCATAATTTTCAATGCTGGATTTCAGGTCAAGAAGAAGCAGTTCTTCCGTAACTTTTTAACCATCATGCTATTTGGAGTGGTTGGTGTTTTTATTTCAACAGCCATCATTTCAGCTGGCAGCTGGTGGCTGTTTCCAAAGATCGGGTTTGTCGGTCTGGAAGCACGGGACTATCTTGCAATTGGAACCATCTTTTCATCAACCGATACTGTCTGTACACTGCAGGTTCTACACCAGGATGAGACTCCTCTACTATACAGCTTGGTTTTTGGGGAAGGAGTGGTGAATGATGCAACATCAGTCGTTCTCTTCAATGCAATCCAAAAGCTCGATGTTTCTAAACTTGGTGGTTGGGCAGTGGTTAATGTCGTCGGAGATTTTCTCTATTTGTTTTCAATGAGTACTGTCCTTGGAATTGCTGCCGGTCTTCTGACTGCATATGCTCTGAGAACCTTATACTTTGGTAGGCATTCAACCGACCGTGAAATTGCTCTAATGGTCTTAATGGCGTACCTCTCTTACATGTTGGCCGAGCTGTTACACCTCAGCGGCATTCTCACAGTCTTCTTTTGTGGGATTGTCATGTCACACTATGCATGGCATAATGTGACAGACAATTCAAGAATCACAACGAGGCATCTATTTGCGACAATGTCCTATATCGCAGAAACATTTATCTTTCTTTATGTGGGAATGGATTCTCTCGACACCGAGAAATGGAAAATGAGCAAGATAAGCTTCAGGAAATCCATTGGCATCTATTCTACTATCATCTTTCTAATATCACTTGGACGTGCTGCATTTGTGTTTCCTCTCTCCGCTTTATCCAATTATATGAATAAAAGTGCTGAGAGAATATCGATTACATTCAAACACCAGGTTATAATTTGGTGGGCTGGGCTTATGAGAGGAGCTGTTTCTATTGCTCTGGCTTTCAGTCAGTTTACATACTCTGGCTTTACGTGGAATCCTGTTCACGCTACAATGGTCACTAATACCGTTATTGTTGTACTTTTTACCATGCTGGTGTTTGGTTTTCTGACTAAGCCGCTTATACACATTCTGCTTCCTCCGCATGCAATGGACAGACCCATTCGTGGGGAGTCTATTTCCCCCAAAGAAGACCTCAGCCTTACCTTGCTCTCATTTGAGGAATCCACAACAACCAACATGCTTCGTGCAAAGAACAGTTTGTCCATGTTACTAGTAAGGCCTGTGTACACCATACACTACTATTGGAGGAAGTTCGATGATGCCTACATGAGGCCTGTGTTTGGAGGACCCTGCTGA 1599 0.429 MFFSVFPLPSLQGYTGLMTSYLVGGLVNATDHTHVVSISVFVAVLCLCIVIGHLFEENRWVNESITAILIGCITGTIILFWSKGTSSHILRFDEEVFFIYLLPPIIFNAGFQVKKKQFFRNFLTIMLFGVVGVFISTAIISAGSWWLFPKIGFVGLEARDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAIQKLDVSKLGGWAVVNVVGDFLYLFSMSTVLGIAAGLLTAYALRTLYFGRHSTDREIALMVLMAYLSYMLAELLHLSGILTVFFCGIVMSHYAWHNVTDNSRITTRHLFATMSYIAETFIFLYVGMDSLDTEKWKMSKISFRKSIGIYSTIIFLISLGRAAFVFPLSALSNYMNKSAERISITFKHQVIIWWAGLMRGAVSIALAFSQFTYSGFTWNPVHATMVTNTVIVVLFTMLVFGFLTKPLIHILLPPHAMDRPIRGESISPKEDLSLTLLSFEESTTTNMLRAKNSLSMLLVRPVYTIHYYWRKFDDAYMRPVFGGPC* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00303 532 Gene3D - 156 209 - -
Eupl06g00303 532 Pfam Sodium/hydrogen exchanger family 41 454 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Eupl06g00303 532 PANTHER SODIUM/HYDROGEN EXCHANGER 29 528 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Eupl06g00303 532 NCBIfam sodium/hydrogen exchanger 3 36 459 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Eupl06g00303 532 PRINTS Na+/H+ exchanger signature 165 175 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Eupl06g00303 532 PRINTS Na+/H+ exchanger signature 96 107 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Eupl06g00303 532 PRINTS Na+/H+ exchanger signature 125 133 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Eupl06g00303 532 PRINTS Na+/H+ exchanger signature 110 124 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00303 Eupl-Chr6 4663522 4670470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00303 29 531 Antiporters AT5G55470 73.031 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00303 - - nnu:104606553 835.484