Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00294 ATGTCGGAAACCATTGTAAGAGAACCTCGTCTAGTCGTCAGAAAATTACAGGCCAGACCTCAACATGAAGGCGATGGAGCCGTCGTTAGAAGAAGCATTGGCAGGCCTGAGTTGAAGTACTTCGATCCTTTTCTGTTTTTGGATGAATTCTCAATCTCAGCTCCTGCCGGATTTCCTGACCACCCACACAGAGGGTTTGAGACGGTTACCTACATGTTGCAGGGAGCAGTGACACATGAAGATTTTGAGGGGCACAAAGGTACAATAAGAGCCGGCGATTTACAGTGGATGACGGCCGGTAGAGGGATAGTGCACTCAGAAATGCCTGCAGAGCAGGGGACCCAGAAGGGTCTACAGTTGTGGATCAACCTCGCTTCCAAATACAAAACGATCGAGCCAAGATATCAAGAGTTACAGAGTAAGGACGTTGCAGAAGTCGCAAAAGACGGGGTCAGGGTTCGTGTTATAGCTGGCGAAGCATTAGGAACCCAATCACCCATCTACACAAGGACCCCCACCATGTATCTGGACTTCACTCTCAAACCAGGAGCTCATCTCCAACAACCCATCCCACCAACGTGGAACTCCTTCGTCTACATCATAGAAGGCGAGGGTATCTTTGGTAATTTGAAATCGTCGCCAACGACAGCCCACCACATTCTTGTTCTAGGCTCCGGGGATTGTCTGGAAGCATGGAACGAGTCTTCCAAGCCACTCAGATTCATATTAGTTGGAGGTGAACCATTGGGTGAACCTGTGGTGCAGTTTGGGCCCTTTGTGATGAACACTCAAGAAGAGATTGACCAGACCATCGATGATTATCAGTATTGCAAAAATGGATTTGAGAAAGCAAAGCATTGGAGATCAGAAGGCATGCTTGAGCTTGATTTTTAG 894 0.4799 MSETIVREPRLVVRKLQARPQHEGDGAVVRRSIGRPELKYFDPFLFLDEFSISAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIRAGDLQWMTAGRGIVHSEMPAEQGTQKGLQLWINLASKYKTIEPRYQELQSKDVAEVAKDGVRVRVIAGEALGTQSPIYTRTPTMYLDFTLKPGAHLQQPIPPTWNSFVYIIEGEGIFGNLKSSPTTAHHILVLGSGDCLEAWNESSKPLRFILVGGEPLGEPVVQFGPFVMNTQEEIDQTIDDYQYCKNGFEKAKHWRSEGMLELDF* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00294 297 SUPERFAMILY RmlC-like cupins 10 289 IPR011051 -
Eupl06g00294 297 Gene3D Jelly Rolls 144 249 IPR014710 -
Eupl06g00294 297 CDD cupin_pirin_C 172 248 - -
Eupl06g00294 297 CDD cupin_pirin_N 27 124 - -
Eupl06g00294 297 PIRSF Pirin 8 288 IPR012093 -
Eupl06g00294 297 Gene3D Jelly Rolls 23 275 IPR014710 -
Eupl06g00294 297 FunFam pirin 23 160 - -
Eupl06g00294 297 PANTHER PIRIN-RELATED 6 290 IPR012093 -
Eupl06g00294 297 Pfam Pirin C-terminal cupin domain 175 280 IPR008778 -
Eupl06g00294 297 Pfam Pirin 29 122 IPR003829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00294 Eupl-Chr6 4478017 4480970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00294 9 285 Calmodulin-binding Proteins AT3G59220 60.573 2.79e-128 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00294 K06911 - nnu:104594185 522.316