Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00280 ATGGAGATTTGCAGAAAATTAGGGTTTGAGAAATTTGAAGAGGGAAAGAAGAAGGTATGCTTTTGCAAAGACGGGGACAGAAGCTTGAGAGAGTGGGGGAGTAGAGGGATTTCATCTTGGAAAGAAATAACATACAAAAAGAACTCCGAAGTTTGTTCTGGTTTGAAAGTTTTGAAAACAGGAGGGAAGGAAAGAGATGACGACACATACAAGATGACAGATAAAATATGGAATGTCTTAAACATTGGTCTTCTCAAATACTTCAGTATATCTGTTAAGACTTTGGGAACTATGAAGATCACAAGCCTTTATCTCATTCATGGCGTTTGTGGGGGAGGTGAGCTGTCGGAAACTGAATCTTTTGTTGCTTTTATTCGAGCCCTTGATCCAAAAAATTTGGTTGGGACTAGGTGGAATGGGTCTGTGCCGGATCACTGCTCAGATCAGTGGACGGGAGTAAAATGCGATTTACAGACCCATACCATAACAGAGATAAGGCTAGAAAATTTGAATCTCAGTGGGACAATAGATGCAGATTCACTCTGCAGGCTCCCATATCTTCGAGTTCTAAGTTTAGCCAATAACCACATCATAGGAAGTATTCCTGATTCGATATCGAACTGCATGAGCTTGACCCATTTGAATCTGAGCAGTAATTTGCTGCACGGGATGGTACCCACATCTCTAACTAACTTGAAAAATCTCAGGAGCTTTGATATCTTGAACAATAACTTCTCGGGGCCCATTCCAAATTCTGAACAGCAACTCAAGCATGCCTACCTGTATACCATCAAACCTAGTAGATTCAGGAGCATACTGAATCTCAATTATACAGAAACGTCAATGGACTCGACACATATTTTTGCAGCTAACCCAACCACTTACCCTGAGGCGGACACTGGAGAAAAAATTACGATGAGAGAATGGAAACCATGGATCCTATTAGTGCTTGGTATTGCATTCTTTATGCTCTTCGTGTTCTTTTTGAACAAGAGATATGCTAAAACCAAAATCATCAAGGGCAAAGAGAATTGGAAGTCCCTTGAGGACACCTCCATCAAGATTCCGGAAGTCAAAGCTGGAGAAGAAATCAAGCGAGAGGAAGAACGCTCTGAGCTTGTGTTCTTTGTTCAAGAACATGAAAAATTTAAAATAGAAGATCTCCTCGAGTCTGCAGCTGACTTACAAGGCCAGAGTCTTTGCAGCAGTCTTTACAAGGCATACAATGAGGCAGATCGGAAACTTGAAGCACCCAAACATTCTACCCTCGTCGCTTACCATTCTTCCATAGAAGAAAAACTTCTGATCTACAGATACCAAAGGAACGGGAGCCTGTTAGCCCTACTAGAAAACTATGCAGAAGGTAAGAGGGATTTCTCTTGGAGACTTCGGCTGTCCATAGCAAATGGGATTGCACAGGGGTTGGACTTCATATCTCGGAGGTCTTGCAGTGAGGAAAGCATCCCTCACGGGAACCTTAAGCTTTCTAATATCTTGTTGACTGAGAATGAGGAACCATTAATAAGTGAATATGGATTTCAGAGATTTATAGATCCAAAGAGAGCTCTTCTCTATTCCTCCAATGGGTATAAAGCCCCTGAGAAAAGCTTAACGAGACAGGCCGATGTGTTCAGTTTTGGTATCATTCTTCTCGAGTTACTAACAGGGAAAACTGTTGAAAGAAGTGGATTGGATCTTCCCAAATGGGTCAAGTCCATGGTGAGGGAGGAATGGACTGGAGAAGTATTTGATAAGGAGGTGAACAAGGCAGGGAAGCAATGGGCATTTCCACTGCTCAATGTTGCTCTTAAGTGTGTGTCACATTCCCCTGAGCAGCGACCAAACATAGCTGAGGTTTTGGACAAAATAGAGGAGGCTGTGAATGATCAAGAAGACTTTTCTTTTTCATCAACATCTTCTGTAGAATCCAACCATCAAGATTTCTCTCTGCTTCACACGGTCATACCAGAGGCTTGGGAAACTCCAGGATCGAACCACTGA 2001 0.4228 MEICRKLGFEKFEEGKKKVCFCKDGDRSLREWGSRGISSWKEITYKKNSEVCSGLKVLKTGGKERDDDTYKMTDKIWNVLNIGLLKYFSISVKTLGTMKITSLYLIHGVCGGGELSETESFVAFIRALDPKNLVGTRWNGSVPDHCSDQWTGVKCDLQTHTITEIRLENLNLSGTIDADSLCRLPYLRVLSLANNHIIGSIPDSISNCMSLTHLNLSSNLLHGMVPTSLTNLKNLRSFDILNNNFSGPIPNSEQQLKHAYLYTIKPSRFRSILNLNYTETSMDSTHIFAANPTTYPEADTGEKITMREWKPWILLVLGIAFFMLFVFFLNKRYAKTKIIKGKENWKSLEDTSIKIPEVKAGEEIKREEERSELVFFVQEHEKFKIEDLLESAADLQGQSLCSSLYKAYNEADRKLEAPKHSTLVAYHSSIEEKLLIYRYQRNGSLLALLENYAEGKRDFSWRLRLSIANGIAQGLDFISRRSCSEESIPHGNLKLSNILLTENEEPLISEYGFQRFIDPKRALLYSSNGYKAPEKSLTRQADVFSFGIILLELLTGKTVERSGLDLPKWVKSMVREEWTGEVFDKEVNKAGKQWAFPLLNVALKCVSHSPEQRPNIAEVLDKIEEAVNDQEDFSFSSTSSVESNHQDFSLLHTVIPEAWETPGSNH* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00280 666 Gene3D Ribonuclease Inhibitor 116 286 IPR032675 -
Eupl06g00280 666 ProSiteProfiles Protein kinase domain profile. 322 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00280 666 SUPERFAMILY L domain-like 123 269 - -
Eupl06g00280 666 Pfam Leucine rich repeat 185 245 IPR001611 GO:0005515
Eupl06g00280 666 Pfam Protein tyrosine and serine/threonine kinase 419 622 IPR001245 GO:0004672|GO:0006468
Eupl06g00280 666 FunFam Nuclear pore complex protein NUP107 114 273 - -
Eupl06g00280 666 Gene3D Transferase(Phosphotransferase) domain 1 441 638 - -
Eupl06g00280 666 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 105 629 IPR046959 -
Eupl06g00280 666 SUPERFAMILY Protein kinase-like (PK-like) 409 629 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00280 Eupl-Chr6 4316934 4323650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00280 132 639 Receptor kinase-like Gene Family AT2G36570 30.612 9.00e-67 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl06g00280 PK_Tyr_Ser-Thr 7.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00280 - - vvi:100252011 618.616