Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00276 ATGGAGGAGAATGTGAAATCTGAACTTCGAAATTTTAATAGAAGATCTCATGAAGCAGAAATCAGTGCTTCTGAGCGTCGATTTGAGATCTCCAATGGCGGAAACAGTGTGAATTCTGGTTCCGATAACGCTTTAATCGGAGAAGATCCAAAAAGGGACGATTTTTCTGTAAAATTTGATTCTAGAATTTTATCTAGTGCCGGATTGAACGCTGCGAGGTACAAATCGATGTCTCCGGCGAGACTTCCGATCTCAAGGTCGCCGTGTTTGACGATCCCTCCTGGTTTGAGCCCGACGACGTTGCTTGATTCTCCTGTTCTTCTCTCGAACATGAAGGCAGAGCTTTCCCCAACTACTGGTACCTTCACCAAGCGTCAAATCATGCATGATACTGTTGTTTCTGACACATTCTCTTCTCTGAGGGACGATTCCAATAATAATAGTCATGATGAAAGAAGCTCTGGTGATTTTGAGTTTAAACCCCACATTAGATCGAGCTTGGGTTCAGGCCTATCATTATTGGGACCTTTGGCTTCTGCAGGGTCGACCCACCAGCAATGCGAGCCATCTCTGCAAGTTCAAGGTCAACACCAGTCTCAGACATTTGCATCCTCATCTTCCGTTAAAAATGAGAATATGGCAGCCTCCTCGCATGAATTGACTCTATCTGTTACTGCTCCAAACCCACCAGTTTACACGGTTACTTCAAGAGCTAGTGAACCTGCCGAAGTTGCTTCTGATGAGTCGCGGCAGAGACAGGACTTGGACAGTGGTGTTCAAACAACACAATCCGATCATAAAGGAACTAGTGCTGCAATAGCAGCTGAGAAATCGTCTGAAGATGGATATAATTGGCGAAAATATGGGCAGAAACATGTTAAAGGATGTGAATTTCCACGGAGCTATTACAAATGTACACATCCCAACTGCGAAGTGAAAAAGCAATTGGAACGGAATCATGATGGACAGTTTACGGAGATTATCTATAAGGGAAAGCATGATCATCCTAAACCTCAGCCTAGCCGTCGAATGGCAGTTGGTCCAATTCTGTCTATCCAAGAAGAAAGATCTGATAGATTTTCTTTAAACAGTATAGAAGGCAAGTCAACAAATGCACATGGCCAGACATCTCATCATACCGAGCCAAATGGTACTCCTCCTGAGCTTTCTCTAGTCACAGAAAGTGAAAATGATGTAGAAGGTGCAGGTGCACAATCGAAAAAGATTAGCGATGAGGTTGATGATGATGATGATCCAGAGTCTAAGCGCAGGAAGAAAGACATTGGTGGTGTGGATGTTTCTCCTATGGGTAAAATGACCCGAGAACCACGTGTTGTTGTTCAAACTCTAAGTGAGGTTGATATACTGGATGATGGTTACCGCTGGCGTAAATATGGGCAGAAAGTTGTGAAAGGGAATCCTAATCCGAGGAGTTACTACAAATGCACAAATGCTGGATGCCCAGTTAGGAAACATGTGGAGAGGGCATCACAAGATCCGAAAGCAGTTATTACCACATACGAGGGAAAACATAATCATGATGTACCTGCTGTGAGGACTAGTAACCATGACACAGCAGGGTCCACAATTCATAATACAGCTTCAAATGGCATGTTTAGGACTCGATTAGAAGAATGTGACACAATTAGCCTTGATCTTGGGGTTGGGATGAGCTTGAGCCCTGAACATAGATCAGATGAGAAGCAGCAAACATGGGATGCAGAACCTGTCCAAATTCAATCCCACATTGCCGGTCCCAGTTGTGGTAGGGTGATTCAAGAAGCCACAGTTTGGGCACATGATGGTGGTTTAAACGATGGTGCAGATCGGGACAGATCAAGGGAAGGCCGAGGTGAAAGCTTTAGCTTTGAGACTCCTGTAAACCATTCCTCTAACCTGTATCAGCAGAACATGGGAAGATTAATAATGGGTCCATAA 1938 0.4417 MEENVKSELRNFNRRSHEAEISASERRFEISNGGNSVNSGSDNALIGEDPKRDDFSVKFDSRILSSAGLNAARYKSMSPARLPISRSPCLTIPPGLSPTTLLDSPVLLSNMKAELSPTTGTFTKRQIMHDTVVSDTFSSLRDDSNNNSHDERSSGDFEFKPHIRSSLGSGLSLLGPLASAGSTHQQCEPSLQVQGQHQSQTFASSSSVKNENMAASSHELTLSVTAPNPPVYTVTSRASEPAEVASDESRQRQDLDSGVQTTQSDHKGTSAAIAAEKSSEDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCEVKKQLERNHDGQFTEIIYKGKHDHPKPQPSRRMAVGPILSIQEERSDRFSLNSIEGKSTNAHGQTSHHTEPNGTPPELSLVTESENDVEGAGAQSKKISDEVDDDDDPESKRRKKDIGGVDVSPMGKMTREPRVVVQTLSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCPVRKHVERASQDPKAVITTYEGKHNHDVPAVRTSNHDTAGSTIHNTASNGMFRTRLEECDTISLDLGVGMSLSPEHRSDEKQQTWDAEPVQIQSHIAGPSCGRVIQEATVWAHDGGLNDGADRDRSREGRGESFSFETPVNHSSNLYQQNMGRLIMGP* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00276 645 MobiDBLite consensus disorder prediction 178 278 - -
Eupl06g00276 645 MobiDBLite consensus disorder prediction 144 159 - -
Eupl06g00276 645 FunFam WRKY transcription factor 33 443 509 - -
Eupl06g00276 645 Pfam WRKY DNA -binding domain 280 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00276 645 Pfam WRKY DNA -binding domain 457 513 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00276 645 MobiDBLite consensus disorder prediction 405 431 - -
Eupl06g00276 645 ProSiteProfiles WRKY domain profile. 274 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00276 645 MobiDBLite consensus disorder prediction 178 242 - -
Eupl06g00276 645 SUPERFAMILY WRKY DNA-binding domain 448 516 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00276 645 SMART WRKY_cls 456 515 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00276 645 SMART WRKY_cls 279 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00276 645 MobiDBLite consensus disorder prediction 28 43 - -
Eupl06g00276 645 MobiDBLite consensus disorder prediction 519 533 - -
Eupl06g00276 645 MobiDBLite consensus disorder prediction 1 51 - -
Eupl06g00276 645 MobiDBLite consensus disorder prediction 514 533 - -
Eupl06g00276 645 MobiDBLite consensus disorder prediction 604 619 - -
Eupl06g00276 645 FunFam WRKY transcription factor 266 339 - -
Eupl06g00276 645 MobiDBLite consensus disorder prediction 137 161 - -
Eupl06g00276 645 MobiDBLite consensus disorder prediction 366 437 - -
Eupl06g00276 645 Gene3D WRKY domain 267 339 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00276 645 Gene3D WRKY domain 441 517 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00276 645 ProSiteProfiles WRKY domain profile. 451 516 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00276 645 MobiDBLite consensus disorder prediction 601 627 - -
Eupl06g00276 645 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 102 535 IPR044810 GO:0003700
Eupl06g00276 645 MobiDBLite consensus disorder prediction 1 25 - -
Eupl06g00276 645 SUPERFAMILY WRKY DNA-binding domain 278 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00276 645 MobiDBLite consensus disorder prediction 366 392 - -
Eupl06g00276 645 MobiDBLite consensus disorder prediction 255 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00276 Eupl-Chr6 4265066 4276299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00276 77 645 WRKY Transcription Factor Family AT4G26640 46.329 1.63e-148 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl06g00276 WRKY 4.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00276 - - nnu:104606587 838.18