Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00275 ATGCTACTCCATTGTAAAGTTGTAGCCATAACCTTCATCTTAATTGCACGGGGATGTGTGGACGGTGCTTTGGATACTGGCTTCCTAATGTTCTTTTATCATTTCAAGGCTTCTGCAGGGTCGAACCACCAGCATGGTGAGCCATCTGTGCAAGTCCAAGGTCAATGCCAGTCTCAGACATTTGTAACCTCACCTTCAGTTAGAACTGACAATATGTCAGCCTCCTCACAGGAATTGACTCTATCTGTAATTCCAAACCCACCACTTTACATGGTTACTTCAAGAGATAGTGTTCCGGTTGAGGTTGCTTCTGATTGCTCACAACAGAGACATGGCTCGGACAGTGGGGTTCAAGCAACACAATCTGATCATAAAGGGACTATTCCTTCAATAGCAGCTGAGAGATTGTCAGAAGATGGATATAACTGGCGAAAATATGGGCAGAAACATATTAAAGGAAGTGAATTTCCACGAAGCTATTACAGATGTAGCCATCCTAATTGCCAAGTGAAAAAGCAATTGGAACGATCTCCTAATGGCCAGATTACAGAGATCATCTATAAGGGAGAGCATGATCACCCTAAACCTCAGCCTAGTCATCGAATAGCAGTTGGAACAATTCTGTCTACCGAAGAAGAAAGATCTTGTAGAATTTCTTCTTTAAACAGCATTGAAGACAAGTCACCAAATGGACAGGACCTGACATCTCATCATACCAAGCCAAATGGTACCCCCGAGTGTTCTCCGGTCACAGCTAGTGATGATAACATAGAAGGTGCAGGTGCACAATCGAGCGTGATTGGAGATGAGGTTGAGGATGATGATGATCCAGAGTCTAAGCGTAGGTGCCTTAAGCTCAATACAGAGACGGCCAGCAGTGCTTCTGCAGCGTTGAACCACCAGCAATGCAAGCCATCTGTGCAAGTCCACGGTCAATGCCATTCTCATTCATTTGTATCCTCACCATCAGCTAAAACTGAGAATATTCCAGCCTCCTCACAGGAATTGACTCTATCTGCAACTGTTCCAAATTCACCTGTTTACATGGCTACTTCAAGAGCTATTGTACCTGTTGAAGTTGCTTCTGATGAGTCGCGGCAGACAGAGAGCTTGGACATGGTGGTTCAATCAATACAATCCAATCATAATGTAACTAGTCCTTTGATAGCAGTTGTGAGATCGTCGGAAGATGGATATAACTGGCGAAAATATGGCCAGAAGCAAATTAAAGGAAGTGAATTTCCACGGAGCTATTACAGATGCACACATCCTAACTGCCAAGCTAAAAAGCAATTGGTACAATCTCATGATGGGAAGATTACAGAGATCATCTATAAGGGAAAGCATGATCACCCTAAACCTCAGCCTAGCCTTGGAATGGCTGTTGGTACAATTCTGTCTATCCAAGAAAGATCTGTTAGATTTTCTTCTTTAAACAGTACCGATGACAAGTCATCAAATGGACAGGGCCTGGCATCTTATCATACCAAGCCAAATGGTACCCCCGAGCATTGCCCTGTCACAGCGAGTGACGGTGATGTAGAAGGTGCGGGTGCACAATCGAACAGGATTGGTGATGAGGTTGAGGATGATGATGATCCAGAGTCTAAGCACAGGTGCTTTAAGTTCAATAGAGAGACCACTACCAATGCTTCTTCAGGGTCGAACCACCAGCCATGCGAGTCATCTGTGCAAGTCCAAGGTCAATGCACATCTCAGACATTTGTATCCTCACCATCAGCTAAAAATGAGAATATTGCAGCCTCCTCACATGAATTGAATCTATCTGTAACCGATCCAAACCCACCAGTTTACATGGTTCCTATAAGCGCTAGTGTACCTGTTGAAATCACTTCCAATGAGTCGCAGCAGAAACATGGCTTGGACAGTGGGTTTCATGCAATGCAATCTTATCATAAAGGAACTACCGAGAGATCGTTGGAAGATGGATATAACTGGCGAAAATACGGGCAGAAACATATTAAAGGAAGTGAATTTCCAAGGAGCTATTACAGGTGTACACATCCTAACTGCCAAGTGAAAAAGCAATTAGAACGATCTCATGATGGGAAAATTACAGAGATTATCTATATGGGAAAGCATGATCACCCTAAACCGCAGCCTAGCCTTGGAATAGCAGTTGGCACAATTCTGTCTTTCCAAGAAGAAAGATCTGATAGACTCTCTTTTTTGAACAGCACAGAAGACAAGTCATCAAATGGACATGGCCAGACATCTCATCATACCAAGCCAAATGGTACTGCTGAGCTTTCTCTTGTCGTCGCAAGGGGAGATGATGTTGAAGGTGCAGGTGCACAATCGAACCGGATTGGTGACAAGATTGACGATGATGTTGAACCAGAGTCTAAGCATAGGCGCCTTGAGTTCAATACAGAGGCCACTAGCAATGCTTCTTCAGGGTTGAACCACCAGCAATGCAAGCCATCTGTGCAAGTCCAAGGTCAATGTCAGTCGCAGTCATTTGTATCCTCACCATCAGTTAAAATCGAGAATACGGCCACCTCCTCACAGGAATTGACTCCATCTGTAACCGTTCCAAACTCACCTATTCACATGGCAACTTCCAGAGCTATTGTACCTGTTGAAATTGCTTCTGATGAGTCGCAGCAGATAGAGGGCTTGGACAGTGGGGTTCAAGAAACGCAATCCAATCAGAAAGGAACTAGTCCTTCAATAGCAGTTGTGAGATCCTCGGAAGATGGGTATAACTGGCGAAAGTACGGGCAGAAAAATATTAAAGGAAGTGAATTTCCGCGGAGCTATTACAGATGTACACATCCTAACTGCAAAGTGAAAAAGCAATTGGAACGATCAAATGCTGGGAAAATTACAGAAATCATCTATATGGGAAAGCATGATCATCCTAAACCTCAGCCTAGCTTTGGAATGGTGGTTGGTACAATTCTGTCTATCCAAGAAGAAAGATCTAGTAGATATTCTTCCTTAAACAGCATAGAAGACAATCCATCTAATGGACATGGCCAGACATCTCATCATACCAAGCCAAATGGGACCACTGAGCTTTCTTCTGTCACAGCAAGGGGAGATGATGTAGAAGGTGCATGTGCAAACTTGAACAGGATTGGCCCTGAGGTTGAGGATGATGATGATCCAGAGTCTAAGCGCAGGAAGAAAGACATTGGTGGTGTAGATGTTACTCCAATGGGTAAAGTGACCCGGGAACCACATGTTGTTCAAACCCTTAGTGATCTCGATGTACTGGATGATGGGTATCGCTGGTGCAAATATGGGCAGAAATTGGTGAAAGGGAATCCTAATCCGAGGAGTTACTACAGATGTGCAAAAGCCGGATGCCCAGTTAGGAAACACGTGGAGAGGGCATCACACAATCCCAAAGCAGTTATAACGACATACCAGGGGAAGCATAACCATGATGTACCAGCTGCGAGGACTACTAGCAGCCATGACACAGCAAAGCCCGTAATTCATAATACAGCTTTGAACGGCATGTCGACTAGATCAGAAGAAAGTGAATCGATTAACCTTAATCTTGGGGTTGGGATGAGCTTGAGTCCTGAAAATAGATCAAATGAGAAGCAGCAAACACTAGAAGTAGAACCTATTCAAAGCCAATCTCACATTGCCGATCCCAGTTGTAGTAAGGAGATTCAAGCAGCCCCAGTTTCAGTCCATAGTGGTGATTTAAATGATGGCGCTGATCAGGAAAGATCAAAGGAAGACCAGGATAGATCAAATGAGAAGCAGCAAACACTAGATGCAGAACCTATTCAAAGCCGATCTCACTTTGCTGATCCTGGTTGTAGTAAGGAGATTCAAGAAGCCCCAGTTTCAGTCCATGATGGTGATTTAAATGATGGCACTGATCAGGACAGATCAAAGGAAGACCAGGATAGATCAAATGAGAAGCAGCAAACACTAGATGCAGAACCTATTCAAAGCCAATCTCACATTGCTGACCTCGGTTGTAGTAAGGAGACTCAAGCAGCCCCAGATTCAGCACTTAATGGTGATTTAAATGATGGCCCAGATCACGACAGATCAAAGGAAGACCAGGATGAAAGCTTAAGCTTTGACACTGCACCTGTAAACCATTCTTCTGATCCGTATGGGAAGAACATGGAAAGATTAATAACGGATCCGTAA 4146 0.4397 MLLHCKVVAITFILIARGCVDGALDTGFLMFFYHFKASAGSNHQHGEPSVQVQGQCQSQTFVTSPSVRTDNMSASSQELTLSVIPNPPLYMVTSRDSVPVEVASDCSQQRHGSDSGVQATQSDHKGTIPSIAAERLSEDGYNWRKYGQKHIKGSEFPRSYYRCSHPNCQVKKQLERSPNGQITEIIYKGEHDHPKPQPSHRIAVGTILSTEEERSCRISSLNSIEDKSPNGQDLTSHHTKPNGTPECSPVTASDDNIEGAGAQSSVIGDEVEDDDDPESKRRCLKLNTETASSASAALNHQQCKPSVQVHGQCHSHSFVSSPSAKTENIPASSQELTLSATVPNSPVYMATSRAIVPVEVASDESRQTESLDMVVQSIQSNHNVTSPLIAVVRSSEDGYNWRKYGQKQIKGSEFPRSYYRCTHPNCQAKKQLVQSHDGKITEIIYKGKHDHPKPQPSLGMAVGTILSIQERSVRFSSLNSTDDKSSNGQGLASYHTKPNGTPEHCPVTASDGDVEGAGAQSNRIGDEVEDDDDPESKHRCFKFNRETTTNASSGSNHQPCESSVQVQGQCTSQTFVSSPSAKNENIAASSHELNLSVTDPNPPVYMVPISASVPVEITSNESQQKHGLDSGFHAMQSYHKGTTERSLEDGYNWRKYGQKHIKGSEFPRSYYRCTHPNCQVKKQLERSHDGKITEIIYMGKHDHPKPQPSLGIAVGTILSFQEERSDRLSFLNSTEDKSSNGHGQTSHHTKPNGTAELSLVVARGDDVEGAGAQSNRIGDKIDDDVEPESKHRRLEFNTEATSNASSGLNHQQCKPSVQVQGQCQSQSFVSSPSVKIENTATSSQELTPSVTVPNSPIHMATSRAIVPVEIASDESQQIEGLDSGVQETQSNQKGTSPSIAVVRSSEDGYNWRKYGQKNIKGSEFPRSYYRCTHPNCKVKKQLERSNAGKITEIIYMGKHDHPKPQPSFGMVVGTILSIQEERSSRYSSLNSIEDNPSNGHGQTSHHTKPNGTTELSSVTARGDDVEGACANLNRIGPEVEDDDDPESKRRKKDIGGVDVTPMGKVTREPHVVQTLSDLDVLDDGYRWCKYGQKLVKGNPNPRSYYRCAKAGCPVRKHVERASHNPKAVITTYQGKHNHDVPAARTTSSHDTAKPVIHNTALNGMSTRSEESESINLNLGVGMSLSPENRSNEKQQTLEVEPIQSQSHIADPSCSKEIQAAPVSVHSGDLNDGADQERSKEDQDRSNEKQQTLDAEPIQSRSHFADPGCSKEIQEAPVSVHDGDLNDGTDQDRSKEDQDRSNEKQQTLDAEPIQSQSHIADLGCSKETQAAPDSALNGDLNDGPDHDRSKEDQDESLSFDTAPVNHSSDPYGKNMERLITDP* 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00275 1381 Gene3D WRKY domain 633 707 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 Gene3D WRKY domain 896 965 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 Gene3D WRKY domain 126 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 Gene3D WRKY domain 1066 1142 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 Gene3D WRKY domain 381 455 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 1230 1250 - -
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 107 127 - -
Eupl06g00275 1381 ProSiteProfiles WRKY domain profile. 900 964 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 SUPERFAMILY WRKY DNA-binding domain 1073 1141 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 222 251 - -
Eupl06g00275 1381 SUPERFAMILY WRKY DNA-binding domain 645 706 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 SUPERFAMILY WRKY DNA-binding domain 904 964 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 985 1019 - -
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 222 279 - -
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 1339 1356 - -
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 768 789 - -
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 476 538 - -
Eupl06g00275 1381 FunFam WRKY transcription factor 124 197 - -
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 1031 1062 - -
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 1284 1305 - -
Eupl06g00275 1381 Pfam WRKY DNA -binding domain 648 704 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 Pfam WRKY DNA -binding domain 1082 1138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 Pfam WRKY DNA -binding domain 138 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 Pfam WRKY DNA -binding domain 906 962 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 Pfam WRKY DNA -binding domain 396 452 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 FunFam WRKY transcription factor 381 455 - -
Eupl06g00275 1381 ProSiteProfiles WRKY domain profile. 132 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 SUPERFAMILY WRKY DNA-binding domain 394 454 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 1224 1381 - -
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 1036 1057 - -
Eupl06g00275 1381 FunFam WRKY transcription factor 891 965 - -
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 1306 1322 - -
Eupl06g00275 1381 ProSiteProfiles WRKY domain profile. 642 706 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 832 1164 IPR044810 GO:0003700
Eupl06g00275 1381 SMART WRKY_cls 647 705 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 SMART WRKY_cls 1081 1140 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 SMART WRKY_cls 905 963 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 SMART WRKY_cls 395 453 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 SMART WRKY_cls 137 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 ProSiteProfiles WRKY domain profile. 1076 1141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 ProSiteProfiles WRKY domain profile. 390 454 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 1180 1212 - -
Eupl06g00275 1381 FunFam WRKY transcription factor 636 707 - -
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 732 753 - -
Eupl06g00275 1381 MobiDBLite consensus disorder prediction 476 496 - -
Eupl06g00275 1381 FunFam WRKY transcription factor 1068 1142 - -
Eupl06g00275 1381 SUPERFAMILY WRKY DNA-binding domain 135 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00275 Eupl-Chr6 4240971 4258166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00275 561 801 WRKY Transcription Factor Family AT4G26640 44.215 9.25e-43 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl06g00275 WRKY 3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00275 - - psom:113288121 673.7