Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00272 ATGAGTTCTCAGTTAAGGTCCGAAGCTGGTTCTGCCGGAAAGGACTACCAGTATTCCTCTGTCTATCCCGTGGTTGGCTTAAGTCAATTGGTAGGTTACTCTTCAAATCCAACTCCTCAGGAGCACGGGAGTTCAGGCGACAGGTTGTACTATCAGCCTATGCAAGAGGTCGAGTCCAATTGCTCGCCTCAGAATTTCCAAACTACAGACCACCATCTATCCTCTGATGAAAGCAGCCAAGGGACCCACTTTCCCATTCATACTTCTCGTGAACAGTACTGCAACTTGGAGTCATCCTCTGCAACTGGTGGTTACATGGTTTACACTTCCCCATCTAACCTCAGTTTTTCACCTAACGGGAGCCCCGTATCACAGCAAGATTCTCAGTCATACCCATTGGATCCACATCACTCCCCTGATAACACCTATGGATCTCCAATAAGTGCATCCTGCATTACAGACAATGTCAATGTACTTAGGTACAAGATGAGAGAATTTGAAACTATGATGCTGGGGCCTGATTCAGATATTATGGACGGCTTTGATAGCACCTTCCAGGGTGGAGCTGGCCAAGCATCATTGGAACCAGAGAAGTGGAAACTAATGATGGAGGTGATCTTCAGAGGGGACTTGAAACAGGTGCTCATTGACTGTGCGAGAGCTGTATCAGATGGTGATCTGTTGATGGCTCAGTGGTTGATATCTGAGTTAAGGCAGATGGTATCAGTGTCTGGGGAACCAATCCAGCGGTTGGGTGCATACATGTTGGAAGGGCTCGTCGCGAGGTTGGTCTCCACAGGGAGTTCCATCTACAAAGCCCTGAGGTGCAAAGAACCTGCGAGCGCTGAACTCCTCTCGTACATGCATATCCTCTATGAGGTCTGCCCATACTTCAAGTTTGGGTACATGTCTGCAAATGGTGCCATCGCAGAAGCCTTAAAGGATGAAAGCCGAGTCCACATCATTGACTTCCAGATTGCACAGGGAAGCCAGTGGATCACCCTGATCCAGGCTCTTGCGGCTCGCCCAGGTGGGCCCCCACACATCCGCATCACAGGTATCGATGATTCCACATCAGCATATGCCCGTGGAGGAGGACTTGAGATTGTGGGGCAGAGGCTATCGAGGCTTGCTGAGTCATGCAAGGTGCCCTTTGAGTTCCATGCTGCAGCCATGTCCAATTGCGAGGTCGAGCTTGAAAATCTTGGTGTTCGACCTGGGGAGGCTCTGGCTGTGAATTTTGCATTCATGTTGCATCATATGCCAGATGAGAGCGTGAGCACTCAGAACCACCGGGATCGGTTGTTGAGACTGGTCAAGAGCATGTCGCCCAAGGTGGTGACCCTCGTAGAGCAAGAATCTAACACCAACACTGCTCCGTTCTTGCCACGGTTCATTGAGACACTGAACTATTATACAGCTATTTTTGAGTCGATTGATGTGACCCTCCCGAGGGAGCACAAGGAACGGATAAACGTCGAGCAGCACTGCCTGGCACGGGACATTGTCAATATCATAGCATGTGAGGGCGCTGAGAGGGTAGAACGGCATGAGGTTCTCGGGAAGTGGAGGTCACGGTTTATGATGGCCGGGTTTACTCCACACCCATTGAGCTCGGTGGTCAATGCCACTATTAAGACTCTGTTGGATAACTACTGTGAGAAGTATAGACTCGAAGAGAGGGATGGAGCTCTCTATCTTGGCTGGATGAACAGAGCGTTAGTTGCTTCTTGTGCATGGCGATGA 1746 0.5 MSSQLRSEAGSAGKDYQYSSVYPVVGLSQLVGYSSNPTPQEHGSSGDRLYYQPMQEVESNCSPQNFQTTDHHLSSDESSQGTHFPIHTSREQYCNLESSSATGGYMVYTSPSNLSFSPNGSPVSQQDSQSYPLDPHHSPDNTYGSPISASCITDNVNVLRYKMREFETMMLGPDSDIMDGFDSTFQGGAGQASLEPEKWKLMMEVIFRGDLKQVLIDCARAVSDGDLLMAQWLISELRQMVSVSGEPIQRLGAYMLEGLVARLVSTGSSIYKALRCKEPASAELLSYMHILYEVCPYFKFGYMSANGAIAEALKDESRVHIIDFQIAQGSQWITLIQALAARPGGPPHIRITGIDDSTSAYARGGGLEIVGQRLSRLAESCKVPFEFHAAAMSNCEVELENLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVKSMSPKVVTLVEQESNTNTAPFLPRFIETLNYYTAIFESIDVTLPREHKERINVEQHCLARDIVNIIACEGAERVERHEVLGKWRSRFMMAGFTPHPLSSVVNATIKTLLDNYCEKYRLEERDGALYLGWMNRALVASCAWR* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00272 581 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 136 575 IPR005202 -
Eupl06g00272 581 MobiDBLite consensus disorder prediction 58 84 - -
Eupl06g00272 581 MobiDBLite consensus disorder prediction 116 146 - -
Eupl06g00272 581 Pfam GRAS domain family 211 581 IPR005202 -
Eupl06g00272 581 ProSiteProfiles GRAS family profile. 202 581 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00272 Eupl-Chr6 4221690 4223435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00272 49 581 GRAS Transcription Factor Family AT5G48150 63.636 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl06g00272 GRAS 3.7e-140 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00272 - - ming:122070438 935.25