Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00268 ATGGTGGTTATCTGTGTCTACTTCAACTCCAATCTTCTCTGCTCTTCATCATCTCGCTCGTCTGCTCTGAATCTCTATCACTCGCACTTTAATGGAGAAACCCTGGTGAAGAGCATCAGAAGAGGGAGACGAAGACGAAGCAGTGCCAGTAGTCTCGTTGTTCTCTCAACTCATTCTAACCCTAGAATTCTGAAATCCAATCGGAAGTCCCGGTACGGACAGAAGCTCTCCCCTTATGATAGTGATGATGATGAAGAAGATAGTGGCGAAAATGACGATTCGGAGGATGATCAATTGTCGGTCGATGAATTTGCAGAAATGGAAGAGTTTGATGCTGATTTACAGAGTTCTCATTCGGAGAATGAAGCCAATACAAAACAAGGCAGACGCAAACAACCAAAAAGAGGGTGGGAGGAAAGCTCATCAAAAAGTGGACAAAGTGTGAAAATTACGGACCGCCGATTGGATATAAAACCTGGCAAGAACACCCTGGAGAAGATAAGTCTTGGAGATGCTTATCATGCTTCAAAAAGATTGCAGGAAATGGGTTCTTTAGATACAGATAGCAGAAGAAAGCTGAAGACTGGGAAATCTACAGAGAGCAGGTTTCATCAACTATCAGAAGAATTAGATTTGGATGAAAAATGGTTTCCACTTCTTGATTACCTGAGCGAATTTGGACTTAAGGAGTCACATTTTATCCAAATCTATGAGAGACATATGCCATCCCTTCAGATAAATGTGGCTTCGGCAAGAGAAAGATTGGAGTTCTTGTTGAGCGTTGGTGTCAAACATAGAGACATCAGGAGGATACTTCTAAGGCAACCACAAATTCTGGGGTATACAGTTGAGAGCAATCTGAAGTCCCATGTTGCATTTTTGGTGGGTTTGGGTGTCCCAGATTCCAGAATAGGGCAGATAATTACAGCTGCTCCGTCCCTATTGTCTTATAGTGTCGAGCAATCTCTAAAACCCACGGTCAGGTATTTGATTGAAGAGGTTGGTATCAAAAGAAATGATTTGAGCAAAGTTGTGCAGCTGAGCCCTCAAATTCTGGTCCAGCGGATTGACAATACATGGAACACTCGCTTTTGCTTTCTTTCAAAGGAACTGGGAGCACCCAGAGATAGCGTAGTGAAGATGGTCACTAAACATCCACAGCTTCTTCATTACAGCATCACAGATGGAATACTTCCGAGAATCAACTTTCTCAGGAGTATCGGGATGCGTAATTCTGACATCTTGAAAGTATTAACAAGTCTTACACAGGTATTATCTCTATCATTGGAGGACAATCTAAAGCCTAAGTATTTGTACTTGGTGAATGAACTTCGGAATGAGGTGCAGTCCTTGACCAAATATCCCACGTACTTGAGCTTGTCTTTAGACCAGAGAATTCGGCCTCGCCATAGGTTCTTGGTTGCCCTAAAGAAAGCTCCTAAGGGGCCATTTCCTCTAAGTTCATTTGTTCCAACTGATGAATGCTTTTGTCAGCAATGGGCTGGAACTAGTTTAGATAAGTATTTGGCATTTAGGCAGAGTTTACTTCTCAAGGAGTTTGCAAAGAAGTATGAAAGAAAAGGATAA 1587 0.4222 MVVICVYFNSNLLCSSSSRSSALNLYHSHFNGETLVKSIRRGRRRRSSASSLVVLSTHSNPRILKSNRKSRYGQKLSPYDSDDDEEDSGENDDSEDDQLSVDEFAEMEEFDADLQSSHSENEANTKQGRRKQPKRGWEESSSKSGQSVKITDRRLDIKPGKNTLEKISLGDAYHASKRLQEMGSLDTDSRRKLKTGKSTESRFHQLSEELDLDEKWFPLLDYLSEFGLKESHFIQIYERHMPSLQINVASARERLEFLLSVGVKHRDIRRILLRQPQILGYTVESNLKSHVAFLVGLGVPDSRIGQIITAAPSLLSYSVEQSLKPTVRYLIEEVGIKRNDLSKVVQLSPQILVQRIDNTWNTRFCFLSKELGAPRDSVVKMVTKHPQLLHYSITDGILPRINFLRSIGMRNSDILKVLTSLTQVLSLSLEDNLKPKYLYLVNELRNEVQSLTKYPTYLSLSLDQRIRPRHRFLVALKKAPKGPFPLSSFVPTDECFCQQWAGTSLDKYLAFRQSLLLKEFAKKYERKG* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00268 528 MobiDBLite consensus disorder prediction 64 98 - -
Eupl06g00268 528 MobiDBLite consensus disorder prediction 80 98 - -
Eupl06g00268 528 PANTHER CGI-12 PROTEIN-RELATED 301 422 IPR003690 GO:0003690|GO:0006355
Eupl06g00268 528 SMART mt_12 379 410 IPR003690 GO:0003690|GO:0006355
Eupl06g00268 528 SMART mt_12 305 337 IPR003690 GO:0003690|GO:0006355
Eupl06g00268 528 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Eupl06g00268 528 SMART mt_12 342 374 IPR003690 GO:0003690|GO:0006355
Eupl06g00268 528 SMART mt_12 448 480 IPR003690 GO:0003690|GO:0006355
Eupl06g00268 528 SMART mt_12 415 447 IPR003690 GO:0003690|GO:0006355
Eupl06g00268 528 SMART mt_12 234 264 IPR003690 GO:0003690|GO:0006355
Eupl06g00268 528 FunFam Transcription termination factor MTERF9, chloroplastic 280 515 - -
Eupl06g00268 528 MobiDBLite consensus disorder prediction 123 138 - -
Eupl06g00268 528 Pfam mTERF 220 295 IPR003690 GO:0003690|GO:0006355
Eupl06g00268 528 Pfam mTERF 283 476 IPR003690 GO:0003690|GO:0006355
Eupl06g00268 528 Gene3D Transcription termination factor 3, mitochondrial 281 515 IPR038538 -
Eupl06g00268 528 MobiDBLite consensus disorder prediction 111 154 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl06g00268 mTERF 9.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00268 K15031 - nnu:104594205 733.406