Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00257 ATGGGAACATCTCCCGGCACTAACTTCTACCACCAACCTCCACCAAAAATGCTGCCTCCACGTCAGCAACCACGACCTGCAGGATTACAGACAGCATTATCCCTAGTTTCATCAGACGCATGTGGGTCTCCTGATCTCCAAGAACCTGGTTCAAATTCTGAGCAGGTTCGTGAGTCCCCGTCAGAGAGTGCGAGCTCACGAGAAACCTGGCCTGCTTGTGATGCAATTATGGGAAAGAAACCGGAGAACGAAAAAGGAGAAAACGATTGCCCTGAACAGTCTGTTACTCGTCGGGTTTCTAGTTCTGATAAGATATCTTTACGGGATGTAGCAAGAGAAAGAGTTGAGATAATCTCTGAACGGATGCACCTTCTTCCAGATGAACTTCTAGAAGAGCTCAAGAGTGGGCTTCGGGTTATTCTTGAAGGAACTGGTGGTTCTCAGCATAGAGAAGAGTTTTTGTTTCTGCAGAAACTTGTTCAGAGTAGGGCTGATTTGACAGCTAAAACCCTAATTAGAACACACAGGGTACAGCTGGAAATTCTTGTTTCAATAAACACAGGAATTCAGGCATTTTTGCATCCAAACATCAGTCTCTCTCAAGCTTCCCTCATCGAGGTTTTTTTGTACAAGAGGTGCAGAAATATAGCATGCCAGAACCAGCTTCCAGCTGACGACTGTACCTGCGAAAGATGTACCAATAGAAATGGTTTCTGCAATCTTTGCATGTGTGTGATCTGTAACAAGTTTGATTTCGAGGTGAACACGTGCCGTTGGATTGGTTGTGATTTGTGCTCTCATTGGACCCACACGGATTGTGCAATTCGTGATGGACAAATCAGTATGGGCCCATGTGTTAAAAGTGGTGCAGGCCCCTCTGAGATGCTTTTCAGGTGCCGAGCTTGCAATAGGACATCTGAGTTGTTAGGGTGGGTTAAAGATGTGTTCCAACACTGTGCACCTGTCTGGGACCGGGAGGCTCTGATGAGGGAGCTCGATTTTGTTAGTAGGATCTTCCGTGGAAGTGAGGATCCCAGAGGGAGAAAGCTGTTTTGGAAGTGTGAGGATCTTATAGAAAAGATGAAGACTGGAGTTTCAGAGGCAATGGCTTGCAAAGTGATGCTTCTATTCTTCCAAGAACTTGAAGTTGACCCTGTCAAGAACCTCGAAACTGAGGAAGCTGGTCGTTTGATAGCTCCGCAGGAGGCCTGCAACAGGATCGCAGAAGTGGTGCAGGAGACCATCAGGAAAATGGAAATTGTGGCCGAGGAGAAGATGCGGATGTTCAAGAAAGCTCGTTTGGCTCTTGAGGCTTGTGACAGAGAGCTTGAGGACAAGGCCAGGGAAGTGGCGGAGCTAAAGATAGATAGGCAGAGGAAGAAACAACAGATTGACGAACTGGAGAGCATTGTGAGGCTTAAGCAGGCTGAAGCTGACATGTTCCACCTCAAGGCCAGTGAGGCAAGGGGAGAGGCCGAGAGGCTCCAGAGGATTATGCTTGCCAAGTCAGAGAAGGCAGAGGAGGAATATGCCAGCAGGTACCTGAAACAACGGTTGAACGAGGCCGAGCTTGAGAAGCAGTATCTGTTCGAGAAGATAAAGCTTCAAGAGAGAGTTCACGGGCATCGCAAAGCAGCAGTGGAGGAGGCGACCCTTCCCAGATGCTAA 1668 0.4796 MGTSPGTNFYHQPPPKMLPPRQQPRPAGLQTALSLVSSDACGSPDLQEPGSNSEQVRESPSESASSRETWPACDAIMGKKPENEKGENDCPEQSVTRRVSSSDKISLRDVARERVEIISERMHLLPDELLEELKSGLRVILEGTGGSQHREEFLFLQKLVQSRADLTAKTLIRTHRVQLEILVSINTGIQAFLHPNISLSQASLIEVFLYKRCRNIACQNQLPADDCTCERCTNRNGFCNLCMCVICNKFDFEVNTCRWIGCDLCSHWTHTDCAIRDGQISMGPCVKSGAGPSEMLFRCRACNRTSELLGWVKDVFQHCAPVWDREALMRELDFVSRIFRGSEDPRGRKLFWKCEDLIEKMKTGVSEAMACKVMLLFFQELEVDPVKNLETEEAGRLIAPQEACNRIAEVVQETIRKMEIVAEEKMRMFKKARLALEACDRELEDKAREVAELKIDRQRKKQQIDELESIVRLKQAEADMFHLKASEARGEAERLQRIMLAKSEKAEEEYASRYLKQRLNEAELEKQYLFEKIKLQERVHGHRKAAVEEATLPRC* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00257 555 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 250 270 IPR004082 -
Eupl06g00257 555 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 465 485 IPR004082 -
Eupl06g00257 555 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 163 178 IPR004082 -
Eupl06g00257 555 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 121 143 IPR004082 -
Eupl06g00257 555 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 204 225 IPR004082 -
Eupl06g00257 555 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 323 342 IPR004082 -
Eupl06g00257 555 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 178 193 IPR004082 -
Eupl06g00257 555 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 504 526 IPR004082 -
Eupl06g00257 555 PIRSF UCP025218 17 550 - -
Eupl06g00257 555 Pfam Coiled-coil region of Oberon 430 542 IPR032535 -
Eupl06g00257 555 MobiDBLite consensus disorder prediction 27 68 - -
Eupl06g00257 555 MobiDBLite consensus disorder prediction 1 103 - -
Eupl06g00257 555 Coils Coil 429 477 - -
Eupl06g00257 555 CDD PHD_OBE1_like 243 302 IPR047578 -
Eupl06g00257 555 Pfam PHD - plant homeodomain finger protein 213 336 IPR032881 -
Eupl06g00257 555 SMART PHD_3 243 303 IPR001965 -
Eupl06g00257 555 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 55 540 IPR004082 -
Eupl06g00257 555 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00257 Eupl-Chr6 3969913 3977773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00257 213 422 PHD Gene Family AT5G57380 22.685 2.68e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00257 - - ming:122066467 930.628