Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00251 ATGGAGTACAACAAAGAGGAGGCTTTTAGGGCCAAGGAGACTGCCGAGAGGCGATTTGCTGAGAAAGACTTTGCAGGTGCGAAGAAATATGCGGTGAAGGCTCAAACTCTGGATCCAGAGTTGGAGGGCATCTCTCAAATGCTGGCCACATTTGACGTTTATGTTGCATCCAAGATCCAAATTAATGGAGAAATTGATTTCTATTCGGTTCTTGGACTGAACCCCTCAGCTGATGAGGATACTGTTAAGAAACAGTACAGGAAACTGGCTCTGATTCTTCACCCCGACAAGAACAAAACTGTAGGAGCCGATGGGGCATTCAAGCTCGTGTCTGAAGCATGGGGTCTGTTATCAGATAGTAATAAAAAAACCTCTTATGATCTCAGGAGAAACAAACAATCCTCAGCCAAAGTCTTCCAGTCAAACTCCTCTTCGGCTCAGGCTCCTGGGGTTAATGGGCTCAGCAACTGTTCCAAACCGCTGAACACTCATAATCAACAAAAACCTCCTACATTCTGGACAGTTTGCACTTCATGTAAAGTGCAGTATGAGTATCTCCGGAAGTACGTGAATCACAGACTCTCCTGCAAGAACTGCCGGAAAACCTTTGTGGCTGTAGAAACAGGGGGAACCCCTGTGAACGGTTCTATCCCTTTTTGTTCTTGGTCGTTTACACCAGAATTCGGGCATGTCAGCCAGGTTACATATTTTCCAGCAGATACTATCTTTATTACAGGAACTGGGGCCCCAGGAATTCATCCTGGAATCGGTACCGAGTATCCGAACATGCCATTTCAGTGGAGCCCGTTCCCTGGCCCCTCTACCGGAGTTGTGGGTGCTCATGGATCAACTACTGCAACTGTTGGTGTCGTTCATCAGGCCAACGAGAGAGGAAAAAAAATGGGGGTGAAGGTGAAAGCAGCAGCTAGGGACAAGGATCTTGCAAAGAATGCTAAGATGGGTAATATAGCTTCCAATATGTTTTCCAATTATAACAAAGCTCCCATCTTTAAGGCCGACCGATCTGAGAAGAAAAGGAAGGTAGACGGAGCATATATTTCTGGAAAAGCGTTTGAAGAAATGGGACCAAAAACTGCTATTCCAGAAGTAAAAGTAGCTAACGGATATGGAAATGTTGCCAATCCCTCCAACACAAGTGAGGGTACATATAGACATTCCTCAGTTGCACCAGCATTTGATGCTCGACAATTGTTGATTGACAAGGCAAGAACAGTAATCCGGAAGAAGTTGGAAGAAATGAAGTTGGCTGCAGCTGCAGCAGCAGCAGCAGCTGAGGAGAAGGCAAAGGCTCAACAAACCAAAGTTGATAACAATGACGAGGTACCAACAAGAGCTGATTCGGGCATGTCTGCTGATCAATCAGTGGTTAACGAAATCGGGTTGACCTCAATAACTGTCCCCGACCCTGATTTCCACGATTTTGACCAGGATAGATTAGAGGGATGCTTTAAGCCAAAACAGATATGGGCTTTGTATGATGAAGAAGATGGTATGCCTCGCTTGTACTGTCTGGTCCGCCAGGTCATATCTGTGAAACCATTCAAGATTCATATCAGCTACTTGAGCTCTAAAAGCGACACTGAGTTCGGGTCGGTAAATTGGGTGGATTCTGGGTTTACAAAATCCTGTGGATATTTCAGGGTATGGAACTCTGATATCATTGACAGAGTCAACATTTTCTCTCATGTTATTTGTGGGCTGAAGGCAGGGAGGGGGGGAAGCGTCCAGATTTTCCCTAAAAGAGGTGATATTTGGGCTGTTTACCGGAATTGGTCACCGGACTGGAATAGAATGACCCCTGATGAAGTGAGGCACCAGTATGAGATGGTGGAGGTCCTCGATGACTACACCGAAAAGCTAGGAGTCTGTGTTACCCCACTTGTTAAACTAGATGGGTTCAATACAGTATATCAAAGAAAGACGGATCGGAATGTGATTCGATGGATTCCGAGGGGAGAAATGTTACAATTTTCACACCAGGTACCATCATGGTTGCTCAGAGGAGAAGCGAGTAATCTACCGGATGGGTGCTGGGATTTGGACCCAGCAGCAACTCCGGAAGAGTTGCTTCAGGCTGTAAGAGAAGCAAGGGAAGAGAATAAACCTGTTCCAGCAGAAAAGTAA 2145 0.4578 MEYNKEEAFRAKETAERRFAEKDFAGAKKYAVKAQTLDPELEGISQMLATFDVYVASKIQINGEIDFYSVLGLNPSADEDTVKKQYRKLALILHPDKNKTVGADGAFKLVSEAWGLLSDSNKKTSYDLRRNKQSSAKVFQSNSSSAQAPGVNGLSNCSKPLNTHNQQKPPTFWTVCTSCKVQYEYLRKYVNHRLSCKNCRKTFVAVETGGTPVNGSIPFCSWSFTPEFGHVSQVTYFPADTIFITGTGAPGIHPGIGTEYPNMPFQWSPFPGPSTGVVGAHGSTTATVGVVHQANERGKKMGVKVKAAARDKDLAKNAKMGNIASNMFSNYNKAPIFKADRSEKKRKVDGAYISGKAFEEMGPKTAIPEVKVANGYGNVANPSNTSEGTYRHSSVAPAFDARQLLIDKARTVIRKKLEEMKLAAAAAAAAAEEKAKAQQTKVDNNDEVPTRADSGMSADQSVVNEIGLTSITVPDPDFHDFDQDRLEGCFKPKQIWALYDEEDGMPRLYCLVRQVISVKPFKIHISYLSSKSDTEFGSVNWVDSGFTKSCGYFRVWNSDIIDRVNIFSHVICGLKAGRGGSVQIFPKRGDIWAVYRNWSPDWNRMTPDEVRHQYEMVEVLDDYTEKLGVCVTPLVKLDGFNTVYQRKTDRNVIRWIPRGEMLQFSHQVPSWLLRGEASNLPDGCWDLDPAATPEELLQAVREAREENKPVPAEK* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00251 714 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Eupl06g00251 714 Pfam DnaJ domain 66 127 IPR001623 -
Eupl06g00251 714 SUPERFAMILY Chaperone J-domain 38 126 IPR036869 -
Eupl06g00251 714 PANTHER BNAC03G44070D PROTEIN 1 693 - -
Eupl06g00251 714 Gene3D DnaJ domain 56 149 IPR036869 -
Eupl06g00251 714 CDD DnaJ 66 119 IPR001623 -
Eupl06g00251 714 PRINTS DnaJ domain signature 102 122 IPR001623 -
Eupl06g00251 714 PRINTS DnaJ domain signature 86 101 IPR001623 -
Eupl06g00251 714 PRINTS DnaJ domain signature 68 86 IPR001623 -
Eupl06g00251 714 SMART dnaj_3 65 122 IPR001623 -
Eupl06g00251 714 MobiDBLite consensus disorder prediction 436 456 - -
Eupl06g00251 714 Pfam Domain of unknown function (DUF3444) 470 676 IPR024593 -
Eupl06g00251 714 Coils Coil 414 434 - -
Eupl06g00251 714 MobiDBLite consensus disorder prediction 442 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00251 Eupl-Chr6 3893694 3896997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00251 4 226 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.470 5.71e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00251 - - nnu:104594222 948.732