Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00241 ATGGGGCGTTATCGCGGTGTTCCCAATTCTGCAGATGACGATCTGAGCCAAAGATCAAAGAGGAAAAGGACTGCTTCAAGTGGAGAGAATTTAGATTCTGCAGCTGCAGGTCAAGGAACAAGCGAAGGGAAAAGGGCCTTATACCACTGCAATTATTGCAATAAGGACATTTCTGGAAAGATCCGTATTAAGTGTGTAAAGTGTCCTGATTTTGACCTGTGCGTAGAGTGCTTTTCTATTGGTGCCGAGGTTACACCTCACAAAAGTAATCACCCTTACAGGGTTATGGACAATTTGTCATTCCCCCTTATTTGTCCAGATTGGAATGCAGATGAAGAGATACTGCTTCTAGAGGGAACTGAAATGTATGGATTGGGGAACTGGGCAGAAGTTGCAGAGCATGTCGGTACAAAGAGCAGGGCTCAATGTATTGACCACTATACAACCATCTACATGAACTCGCCATGCTTTCCTCTTCCGGACATGTCTCATGTTGTCGGAAAAAATAGGAAGGAGCTTCTTGCCATGGCTAAAGGACATGGTGACAGTAAGAAAGGATTTCCTACACTTGGGGATCTCACGCTGAAGGAAGAGTCTCCATTTTCTCCTTCAAGAGTCAAGATTGAAGAAGCTGCAGTAGGTAGATCGCCATCAAGCTTAACTGCAGATGTAGATTCTGGGGCTGGTTGTAATAGCACAAATGCGGTAACAGCAGGTGCTATTAAGAAGGCATCAAGCACGGTCCAGATAAAGGATGGTCCTGATGCAATCAAAGTGGGAGATTCTCAATTAGACAGGAGCATCGGTGGAAAGAAACCTAAATCTTCGGGGGATGAGGGGCCATCTTTGACTGAGCTTAGTGGCTATAACCCCAAGAGGCAGGAATTTGATCCTGAATATGATAATGATGCAGAGCAGCTACTCGCAGAGATGGAGTTCAAGGATACTGATAACGAAGATGAGCATGAACTAAAGCTGCGAGTATTGCATATCTATTCAAAAAGGCTTGATGAGAGGAAACGCAGGAAGGATTTCATATTGGAAAGAAATTTACTTTATTCTGATCCGTTGGAGAAAGATCTCTCTCCCGAAGAGAGGGAGATATGTCAGCGGTATAAGGTCTACATGCGTTTCCATTCCAAAGAAGAGCACGAGGAATTAATTAAGACTGTTATTGAGGAGCATAGAATTCGGAAAAGAATTCAAGAACTTCAGGAAGCTCGGGATGCTGGTTGCCGTACATCAGCTGAGGCAGATAGATATCTTGAACATAAGAGGAAGAAGGAAGCTGAAGAATGTGCCCGTAAAGCAAAGGAAAGTGCTCCAGTCGGTCCTAGTGGGAAAGTACTGCAAAGGGTCATTCGTCCCAAAGGAGAACCTGATAGCAGTCCTCGTGGAGGTGTAAAGGGGTCCACTGGTTTAGAGTCCTCTGGCAAGGATTCTTCTTCCACAACTGCAGGACATGCTTCTGCAAGTTCCTTGGACGACTGGGATATCTCGGGACTTCCTGGGTCAGATCTACTATCTGAAACTGAAGAACGGCTATGCCGTGAGACCAAGATGCTCCCTTTTCAATATCTTAAAATACAGGAGGTGATGTCCATAGAGATCTTCAAAGGGAACATCACCCAGAAATCAGACGCTCATCGCTTCTTCAAAGCCGACCCAAGCAAGTTGGATAGAGTATACGATATCCTTGTTAAAAAGGGAATTGCTCAACTGTGA 1725 0.4481 MGRYRGVPNSADDDLSQRSKRKRTASSGENLDSAAAGQGTSEGKRALYHCNYCNKDISGKIRIKCVKCPDFDLCVECFSIGAEVTPHKSNHPYRVMDNLSFPLICPDWNADEEILLLEGTEMYGLGNWAEVAEHVGTKSRAQCIDHYTTIYMNSPCFPLPDMSHVVGKNRKELLAMAKGHGDSKKGFPTLGDLTLKEESPFSPSRVKIEEAAVGRSPSSLTADVDSGAGCNSTNAVTAGAIKKASSTVQIKDGPDAIKVGDSQLDRSIGGKKPKSSGDEGPSLTELSGYNPKRQEFDPEYDNDAEQLLAEMEFKDTDNEDEHELKLRVLHIYSKRLDERKRRKDFILERNLLYSDPLEKDLSPEEREICQRYKVYMRFHSKEEHEELIKTVIEEHRIRKRIQELQEARDAGCRTSAEADRYLEHKRKKEAEECARKAKESAPVGPSGKVLQRVIRPKGEPDSSPRGGVKGSTGLESSGKDSSSTTAGHASASSLDDWDISGLPGSDLLSETEERLCRETKMLPFQYLKIQEVMSIEIFKGNITQKSDAHRFFKADPSKLDRVYDILVKKGIAQL* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00241 574 PIRSF Txn_adaptor_ADA2 35 574 IPR016827 GO:0003713|GO:0006357|GO:0035065
Eupl06g00241 574 CDD SANT 108 150 IPR001005 -
Eupl06g00241 574 Pfam Myb-like DNA-binding domain 107 149 IPR001005 -
Eupl06g00241 574 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 48 569 - -
Eupl06g00241 574 SUPERFAMILY Homeodomain-like 101 154 IPR009057 -
Eupl06g00241 574 SMART sant 104 153 IPR001005 -
Eupl06g00241 574 ProSiteProfiles SWIRM domain profile. 488 574 IPR007526 GO:0005515
Eupl06g00241 574 FunFam Transcriptional adapter 2 101 153 - -
Eupl06g00241 574 Gene3D - 488 573 IPR036388 -
Eupl06g00241 574 MobiDBLite consensus disorder prediction 253 297 - -
Eupl06g00241 574 MobiDBLite consensus disorder prediction 474 491 - -
Eupl06g00241 574 MobiDBLite consensus disorder prediction 1 38 - -
Eupl06g00241 574 CDD ZZ_ADA2 48 96 IPR041983 -
Eupl06g00241 574 FunFam Transcriptional adapter 41 96 - -
Eupl06g00241 574 SUPERFAMILY Homeodomain-like 478 571 IPR009057 -
Eupl06g00241 574 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Eupl06g00241 574 MobiDBLite consensus disorder prediction 433 497 - -
Eupl06g00241 574 SUPERFAMILY RING/U-box 48 111 - -
Eupl06g00241 574 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Eupl06g00241 574 ProSiteProfiles Myb-like domain profile. 108 151 IPR001005 -
Eupl06g00241 574 FunFam Transcriptional adapter 2 489 573 - -
Eupl06g00241 574 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Eupl06g00241 574 SMART zz_5 44 89 IPR000433 GO:0008270
Eupl06g00241 574 Gene3D - 39 96 IPR043145 -
Eupl06g00241 574 Pfam Zinc finger, ZZ type 47 88 IPR000433 GO:0008270
Eupl06g00241 574 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 155 IPR017930 -
Eupl06g00241 574 Gene3D - 106 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00241 Eupl-Chr6 3789207 3800746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00241 1 571 EF-hand Containing Proteins AT3G07740 50.598 2.15e-179 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl06g00241 Myb_DNA-binding 1.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00241 K11314 - nnu:104606608 916.376