Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00240 ATGAATTCTTCAGGTTTTAGTCTTTTTATAGTGATTTCATTTGTTTTTTTGGGTACCCAATTGTGCTTCTGTGCTGGCCAACAACCTTCGCCACTGAATTTTATTACTTGGGAAGATATGAGAGTGGAGGAAAACTTCAGGAAGTTGAAATTGAACGAAGGGATAAACGGTAGTAGAGTTATTGTGGTAAGCCAGGATGGGACTGGAGATTCAGTTACCGTTCAAGGTGCCGTCGATTTGGTTTCACCTTACAACGAAGGAAGGGTGAAGATTCTGATATTACCGGGGATTTACAGGGAAAGGGTAGTTGTTCCAAGAACCAAGCCTTATGTTTCATTCATAGGGAATCAAAGCTCCAAAACTGTGATTTCTTGGAATACCAAAGCTTCTGACCGAGATTCCAATGGGCAAGAAATTGGGACCTTTAATACAGCTACGGTCGATATAGAATCGGATTATTTCTGTGCTACAGGGATAACTATTGAGAACACGATAGTTGCAGTACCGGGAGGGCAAGGGATGCAAGCTGTTGCATTAAGAATATCCGGCGACAAATCTATGATGTTTAAAGTCAGGATCCTTGGTTCACAAGACACACTCTTAGACCTGAGTGGAACACATTACTACTACCAGTGTTACATTCAGGGATCTATCGATTTTATTTTTGGTAATGCGAGATCACTTTATCAGGAGTGCAGTCTTCATTCAACAGCTAGTAGATTTGGAGCAATTGCTGCTTCTCATAGGAGCTCAGCAATGGAGGATACTGGGTTCTCTTTCATAAATTGTACAGTGACTGGAACAGGGAGGATATACTTGGGCAGAGCTTGGGGTAGATATTCAAGAACAATCTTTTCCTATTGTGACTTGGGTGGTGCTATAAGTCCTACGGGATGGAGCGATTGGGGCGACCCATCAAGGAGAACGACTGTATGGTTTGGCGAATACAAGTGCAAGGGTAGAGGCGCAAATTTAAGGAGACGGGTGCCATGGGCGAAAGCATTCAGCTACGATGAAGCAAGGCCTTTTCTAGATAGGAATTTCATAGATGGAAATCAATGGCTAAGACTTTAA 1074 0.4255 MNSSGFSLFIVISFVFLGTQLCFCAGQQPSPLNFITWEDMRVEENFRKLKLNEGINGSRVIVVSQDGTGDSVTVQGAVDLVSPYNEGRVKILILPGIYRERVVVPRTKPYVSFIGNQSSKTVISWNTKASDRDSNGQEIGTFNTATVDIESDYFCATGITIENTIVAVPGGQGMQAVALRISGDKSMMFKVRILGSQDTLLDLSGTHYYYQCYIQGSIDFIFGNARSLYQECSLHSTASRFGAIAASHRSSAMEDTGFSFINCTVTGTGRIYLGRAWGRYSRTIFSYCDLGGAISPTGWSDWGDPSRRTTVWFGEYKCKGRGANLRRRVPWAKAFSYDEARPFLDRNFIDGNQWLRL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00240 357 Gene3D - 59 357 IPR012334 -
Eupl06g00240 357 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 52 356 - -
Eupl06g00240 357 SUPERFAMILY Pectin lyase-like 58 355 IPR011050 -
Eupl06g00240 357 Pfam Pectinesterase 61 352 IPR000070 GO:0030599|GO:0042545
Eupl06g00240 357 FunFam Pectinesterase 56 357 - -
Eupl06g00240 357 ProSitePatterns Pectinesterase signature 2. 214 223 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00240 Eupl-Chr6 3784547 3787163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00240 12 308 Carbohydrate Esterase AT5G55590 57.143 9.26e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00240 K01051 - ming:122092777 528.48