Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00239 ATGCTCTTCATCATGATGTCTGAGAATGCTCACGGTTTTGTAGAATGGAAAGAGCACTTTGTTTCGCAGGAGCGTGGTAGCCGAGTGGTTCACTATTACTTGACGGATACCTCTGGAGATTCCGTTCTTGCTGTTGTGGGCACAGAGAGAAGTCTCAGGCACATGTTGTATGTTGTTGAGGAGAATTTTTTGCAGGTTTATGGATCTGAAAAGTCCATAAATGCTTGCTTCAAATGGAGATCGAAAAGAGAGGTCGTGGACTGGCTCACTTCATTACTCTCGAAGCACCAACCTACACAAGATTCTTTGAAGTCACCAGCAAATACTTCAACACAAGCTTTAGGATCTCCTGGCTTCTCAATGAATGGATTCAATGCTCCAGAGCCACATCTACCTGATCACACAGGCCGGTTTGCGAGGAAGCTGAAGGGTCATAATTCAGACATTGTGTGGTCAGGTGATGCCTGGACCTGTGGTAAACAGCTCAAGCATTACCCAGCATTTTGCAGGAATGGGACCACTATAGCTATTTTTTCCTTTGTTCTCATCATGGCTGAAGAAGAAAACCATTATCTTGCACACTTAGAAGATATGTATGAAGACAGGAAGGGGCAGAAGAAGGTCAAAGTACGGTGGTTTCATCATAGTCAGGAAGTCGAGCGTGTAATTCCTCGACCGAATCCTCACCCGAAAGAAATTTTCATCACGTCTTATGCCCAGGTCATCAGTGCAGAATGTGTTGACGGTCCAGCCACAATTTTAACTCCTGAGCACTATGAGAAATGCTTGGCCATTCTTCCTCATACTTCTTCAGCCAGACTCTACCTGTGCTTTAGGCAGTTTAGAAACAATAGATTCAAGCCCTTTGATCTAGGGAAATTAAAGGGCTATTTTGCACAATCAATCCTCTCATGTTTAGAAGGAGAGGAAGAGTTTAGCCAGGGGAGCACGAAAAGGCAGGGAACTAAGAGAACGAGAAGTTGCAGAGGGCGTCAGAGGTTTGTGACAAGTCATTCTGGTGTCAGAATTTCAGGCCACAGGAGCCAGATAACGGCCTGTGGACCAGCATATCAGAACTTGAGATTTGGGTTATCAGGTAGGAGGCCGCTGGCTGTCAAATTTGTTGGGCCCCAGGCATCACTTCCCCCGCCTTTTAAGGTTCATGGAAAGGTAGAACTACTGTGTCAAGATAGTGGCATTCGAGGCTGCTGGTTCAGGTGTACAGTCTTGCAGGCATCTCAGAAGCAGTTGAAGGTCCTATATAATGATGTGCAGAATGAAGATGGTAGTGGCAATCTAGAGGAATGGATCCCTGCCTTCAGGCTAGCAGCTCCTGATAAACTGGGCATGAGATGCTCAGGCCGTTTAACAGTCCGGCCATGCCGTTCCACCGAAGATCCAACAGAAGGTGTTTTCGAGACTGGAGCCCCAGTGGATGTATGGTGGTGTGATGGCTGGTGGGAAGGGGTGTTAACTGGTATTGACAATTGTGGAGATGATAGTGTTCAAGTTTACTTCCCTGGTGAGGACATCTTCTCGACATTCCAAAGAAGGAATCTAAGAAGTTCCAGGGACTGGGTAGGGAACCGGTGGGTCGATCTTGAGGCAAAGCCAGATATACTCTCCGTCATTTCTACAGCTGTCAGCCCTGGCACAAAGCTGTCTGCATGCTCGACTATGACCAAAGGGGCCGAGTATGGTGGCTCTGCAATGTCGGACTGTGAAGTTCCTACTACCAAACTTGATACAGTTGAAGAGGATAAGCAAGAATTCGCTGGTTCAGCTGGATCCGATTGCCTTCCAGAAAATGTGAAATGGGTGAACTCAAGGAAGCGACTATGGATTTACGACAAAAGTAAGAAAGGTGGTCATGATGGAGAAGACAAAGATAAAGGTGATAATGATGATGATAATATTGAGGACAAGTTGGATGTGAAAGAGGATACTGAGGCTGCTGACCAGAAATGTGAAGCAGTAGAACTCATGGAAGTGGCTGCACAAGATGTTTGA 2010 0.4627 MLFIMMSENAHGFVEWKEHFVSQERGSRVVHYYLTDTSGDSVLAVVGTERSLRHMLYVVEENFLQVYGSEKSINACFKWRSKREVVDWLTSLLSKHQPTQDSLKSPANTSTQALGSPGFSMNGFNAPEPHLPDHTGRFARKLKGHNSDIVWSGDAWTCGKQLKHYPAFCRNGTTIAIFSFVLIMAEEENHYLAHLEDMYEDRKGQKKVKVRWFHHSQEVERVIPRPNPHPKEIFITSYAQVISAECVDGPATILTPEHYEKCLAILPHTSSARLYLCFRQFRNNRFKPFDLGKLKGYFAQSILSCLEGEEEFSQGSTKRQGTKRTRSCRGRQRFVTSHSGVRISGHRSQITACGPAYQNLRFGLSGRRPLAVKFVGPQASLPPPFKVHGKVELLCQDSGIRGCWFRCTVLQASQKQLKVLYNDVQNEDGSGNLEEWIPAFRLAAPDKLGMRCSGRLTVRPCRSTEDPTEGVFETGAPVDVWWCDGWWEGVLTGIDNCGDDSVQVYFPGEDIFSTFQRRNLRSSRDWVGNRWVDLEAKPDILSVISTAVSPGTKLSACSTMTKGAEYGGSAMSDCEVPTTKLDTVEEDKQEFAGSAGSDCLPENVKWVNSRKRLWIYDKSKKGGHDGEDKDKGDNDDDNIEDKLDVKEDTEAADQKCEAVELMEVAAQDV* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00239 669 Gene3D - 140 295 IPR043151 -
Eupl06g00239 669 SMART BAH_4 173 292 IPR001025 GO:0003682
Eupl06g00239 669 ProSiteProfiles BAH domain profile. 173 292 IPR001025 GO:0003682
Eupl06g00239 669 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 383 634 - -
Eupl06g00239 669 CDD BAH_plant_1 168 297 - -
Eupl06g00239 669 MobiDBLite consensus disorder prediction 618 653 - -
Eupl06g00239 669 SMART agenet_At_2 470 528 IPR014002 -
Eupl06g00239 669 SMART agenet_At_2 383 448 IPR014002 -
Eupl06g00239 669 Pfam Agenet domain 390 461 IPR008395 -
Eupl06g00239 669 MobiDBLite consensus disorder prediction 98 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00239 Eupl-Chr6 3776889 3783624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00239 397 526 PHD Transcription Factor Family AT5G58610 30.370 2.65e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00239 - - nnu:104606611 927.546