Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00231 ATGGGAACAACGAAATCACCAAGTGGTGTAAACTGCTGGATCCGAAGGCAACAATGCCCATGTGGAGAGCGCAAATGTTATATTAGATTTGAAGAAGGAAAGACTGAAGAAGCATCGTTGTCACAAGCTGCAGTTAATACTGATGTCGATGTCGATCCTCCTTATGTAGGACAGACGTTCGAAACTGATGACGAGGCATTCGATTACTACAGCAACTTTGCTAGGAAGAATGGATTCGCAATCAGGAGAGAGAGCTCAAGGAGTAACCAAGATTTAGGATTTTATGCAAGAGTTTTGGTTTGTCATCGTTTTGGTGTTGTTCGACATAGAAAATCAGGCAAACCAGAGCGCCAGAGAGAACGAAAAACAATGGTGTGTGGATGTGAGGCCAAAATGTACATTGTAAAGGAAATAATTGGAGTTGTTCCTCGCTGGTCTGTTAAGAAATTTAATAACGTTCATAACCATGAACTGTTGAAAGATGACCAAGTGCGTCTCCTTCCTGCGTATCGTAAAATTCCAGATGTGGATCGAGAACGCATTTTACTACTCTGTAAAGCTGGGTGTTCTGTGCGTCATATAATGAAGGTGCTGCAATTAGAAAAGGGTGGGGATCCAGGACAATTGCCGTTTCTAGAGAGGGATGTGAGAAACTTTGTTCAATCTTGTAAGGAAATGGATAGGGAAAACGATGTGTCAGAGCTTCTTAATGTGTGCAAGATTGTGAAAGAGAGAGATGCGAATTTTTTTTATGATTTTACAGTGGATGAGAATGCTAAGCTTGACAATATTGCATGGTCGTATGGGGACTCTGCTCGTGCATATGAGTTGTTTGGTGATGTAGTTGTTTTTGACGCCACATATCGTGAGATCACCTATGATAGGCTTCTTGGAGTATGGTTCGGTGTAGACAATCACGGAAAAACCATCTTTTTTGGCTGTGTTCTGTTGCGAGATGAAACGTCTCATTCCTTTGCATGGGCTTTACAGACTTTTCTCCGATTTATGCAAGGAAGATATCCACAGACAATTTTAACTGATATAGATTTGGGGCTTAGAGATGCTATAACAAGTGTGTTGCCAAATACTAAGCATGTTTTTTGTATATGGCATATTGTATCCAAACTGTCAAGTTGGTTCTCTCTTCCCCTTGGATCACGATATGAAGAATTTAAGTCTGAGTTTGATAGGTTGTATAATATGGAAAATAAAAAGGATTTCGAGTGTCAATGGAATCAGATGGTTACTCGGTTTGGACTTGGTTCAAATAAACACATCGCTTTACTCTTTTCTCATCGTGCATTTTGGGCATTACCCCACATAAGAGGTTACTTTCTTGCTCGAATGACTACAACCGAATATTCAAAGCCCATTGATGCATTCTTGAAAGGAATCTTGAGTGCACAAACATGTTTGGAAAGCTTTTTTGAGCAGGTGGGCATTGTTGCCAATTTTAGAAATCAAGCAGGAGAAGAAGATATGGAAGATATTCATCTTAAAACATCCATGCCCATTGAAGAACATGCTTCCAGTATTCTTACGCCTTATGCCTTCAACTTGTTACAAAATGAAATTGTGTTGTCTATGCAATGTGCAGCATTTGAAACAGCTAACGGATCGTATCTTGTGCGGCACCACAAGAAGATGGATGGAGGGCATCTTGTGAGTTGGAATCCGAAAGATGAAAAGATTTATTGTTCTTGCAAGGAATTTGAAGTCTCAGGAATCTTATGCAGACATGCTCTTCGGGTACTTGCATTAAAGAATTATTTTCAGCTTCCAGAAAAATATTTGCCAATTCGATGGCGACGAGGAAGCTCATTAAATCAAAGCAACACAAATGACTGGTCTCAAGCATTTCATTCTCTTACATCAAATCTATTTGTAGAATCATCAATCACGAAAGAGCGTATTGATTATGTCCAGAGAGAACTCATAAGCGTCCTTAATCATGTTAGAAATATGCCAGCCAGTGATGTAGTTGCTTTGAATTTGGAATGTCCACCAATTGATGTTAGAGTTGATGGTGATGCAAATGGTAGTGAATGCAACCCAACTATGAATCCTCTTCAGTCTGAAACTGAGGGACAACCAATGGAGAAAAGGACTAAAAGGTTCTGA 2121 0.3975 MGTTKSPSGVNCWIRRQQCPCGERKCYIRFEEGKTEEASLSQAAVNTDVDVDPPYVGQTFETDDEAFDYYSNFARKNGFAIRRESSRSNQDLGFYARVLVCHRFGVVRHRKSGKPERQRERKTMVCGCEAKMYIVKEIIGVVPRWSVKKFNNVHNHELLKDDQVRLLPAYRKIPDVDRERILLLCKAGCSVRHIMKVLQLEKGGDPGQLPFLERDVRNFVQSCKEMDRENDVSELLNVCKIVKERDANFFYDFTVDENAKLDNIAWSYGDSARAYELFGDVVVFDATYREITYDRLLGVWFGVDNHGKTIFFGCVLLRDETSHSFAWALQTFLRFMQGRYPQTILTDIDLGLRDAITSVLPNTKHVFCIWHIVSKLSSWFSLPLGSRYEEFKSEFDRLYNMENKKDFECQWNQMVTRFGLGSNKHIALLFSHRAFWALPHIRGYFLARMTTTEYSKPIDAFLKGILSAQTCLESFFEQVGIVANFRNQAGEEDMEDIHLKTSMPIEEHASSILTPYAFNLLQNEIVLSMQCAAFETANGSYLVRHHKKMDGGHLVSWNPKDEKIYCSCKEFEVSGILCRHALRVLALKNYFQLPEKYLPIRWRRGSSLNQSNTNDWSQAFHSLTSNLFVESSITKERIDYVQRELISVLNHVRNMPASDVVALNLECPPIDVRVDGDANGSECNPTMNPLQSETEGQPMEKRTKRF* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00231 706 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
Eupl06g00231 706 MobiDBLite consensus disorder prediction 681 706 - -
Eupl06g00231 706 MobiDBLite consensus disorder prediction 681 696 - -
Eupl06g00231 706 Pfam MULE transposase domain 281 374 IPR018289 -
Eupl06g00231 706 Pfam SWIM zinc finger 555 586 IPR007527 GO:0008270
Eupl06g00231 706 SMART 26again6 564 591 IPR006564 GO:0008270
Eupl06g00231 706 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 645 IPR031052 GO:0006355
Eupl06g00231 706 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00231 Eupl-Chr6 3636803 3647230 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl06g00231 MULE 7.8e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00231 - - psom:113302227 1145.95