Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00229 ATGGCCTTTGATGATGCAAAACAGCCCTTTCTCTCGGCGTTATTGGGTAATTCCCCTCAATCCAATCAAAAGAATGCTGTAAAAAGAAGAAGATATCGCCGCTGTAGAAGTGCTCCTACAGGCTTTGTTCTCCCAGAAAAAAATGGTGGCGGATTGCTTCCGCATTCCAAATCCATTTTCACAAAACTCAACCCTAGTTTTATGCAAGTAGCCTTGTTCTTTACCATCTACCTTGGTGTAGGCAGCATCTGCTTCTACCTCGTCAAGGATCAAATCAGGGGTAAGAAAACAAATGGGATTCTTGATGCTGTATATTTTTGCATTGTGACAATGACCACTGTTGGATATGGAGACCTTGTCCCAAATAGCGTCGCCACCAAACTACTTGCCTGTGCTTTTGTCTTTACGGGAATGGCTTTTGTTGGGCTAATTCTTAGTAAATCAGCAGACTTCCTTGTAGAAAAGCAGGAAATACTATTGATTAGAGCCCTACACTTGCATCAAAAAGTTGGTGCAACTGAGATTCTCAAGGAGATCGAAGCCAACAAAGTGAAATACAAGTTTCTTATGACACTGATCCTTCTTATGGTGCTTATTATTGTCGGAACAATCTTCTTATCTAGAGTTGAGAATTTGAACCTTGTCGACGCCTTCTATTGTGTTTGTTCTACCATCACAACTTTAGGTTATGGGGATCGGAGCTTCTCAACCGAAGTAGGCCGTATCTTTGCTATATTCTGGATACTTACCAGTACAATGTGTGTGGCTCAGTTCTTCCTCTACCTTGCTGAGTTAAACACCGAGCGCAGACAACAATTGTTGGTCAAATGGGTTCTTACCCGAAAGTTGACATGCGCAGATCTTGAGGCAGCGGATCTTGATGATGATGGACTTGTGAGTGCTGCTGAATTCATCATATATAAGCTCAAAGAGATGGGGAAGATCAGCCAAGAAGATATTGCAATTGTGATGGAGGAGTTTGAGGATCTTGATGTGGATCAGTCTGGGACATTGTCAGCATCTGATATAATGTCTCAACAGTGA 1044 0.4215 MAFDDAKQPFLSALLGNSPQSNQKNAVKRRRYRRCRSAPTGFVLPEKNGGGLLPHSKSIFTKLNPSFMQVALFFTIYLGVGSICFYLVKDQIRGKKTNGILDAVYFCIVTMTTVGYGDLVPNSVATKLLACAFVFTGMAFVGLILSKSADFLVEKQEILLIRALHLHQKVGATEILKEIEANKVKYKFLMTLILLMVLIIVGTIFLSRVENLNLVDAFYCVCSTITTLGYGDRSFSTEVGRIFAIFWILTSTMCVAQFFLYLAELNTERRQQLLVKWVLTRKLTCADLEAADLDDDGLVSAAEFIIYKLKEMGKISQEDIAIVMEEFEDLDVDQSGTLSASDIMSQQ* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00229 347 Gene3D - 64 158 - -
Eupl06g00229 347 FunFam Calcium-activated outward-rectifying potassium channel 1 64 159 - -
Eupl06g00229 347 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 98 320 IPR003280 GO:0005267|GO:0016020|GO:0071805
Eupl06g00229 347 FunFam Two-pore potassium channel 1 168 276 - -
Eupl06g00229 347 Pfam Ion channel 194 265 IPR013099 -
Eupl06g00229 347 Pfam Ion channel 74 153 IPR013099 -
Eupl06g00229 347 Gene3D - 168 275 - -
Eupl06g00229 347 SUPERFAMILY Voltage-gated potassium channels 66 162 - -
Eupl06g00229 347 SUPERFAMILY Voltage-gated potassium channels 159 286 - -
Eupl06g00229 347 ProSitePatterns EF-hand calcium-binding domain. 292 304 IPR018247 -
Eupl06g00229 347 ProSitePatterns EF-hand calcium-binding domain. 331 343 IPR018247 -
Eupl06g00229 347 PRINTS Two pore domain K+ channel signature 226 235 IPR003280 GO:0005267|GO:0016020|GO:0071805
Eupl06g00229 347 PRINTS Two pore domain K+ channel signature 109 137 IPR003280 GO:0005267|GO:0016020|GO:0071805
Eupl06g00229 347 SUPERFAMILY EF-hand 288 344 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00229 Eupl-Chr6 3627220 3629932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00229 54 347 Ion Channels AT5G55630 64.527 4.06e-146 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00229 K05389 - nnu:104594235 497.278