Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00205 ATGAAACTCACTGACTTACCTGACGAAATCTCGCCCTTCCCCGATGCTGGAAACCTATTGTATGGTCATCGAACTTCTCCGAAAATCGAGTTTGGGTCACAGTTCCCGCTCCAGAAGCTCCGTCCGATCAGAAGCAACGGAGGAGATTTAGCAGACTATCCAGATTCTCGGGCCAATTTTGGTTCCGGAGAGTTGCCGGAAAATGGAAGTCTCGCCGGGAACCTACTATACGGTCATCGTATGGCAGTCACTGCTTCCCCGAACATCGAATTACGGTCGCAAGTGATGCCGCTCCAGATTAAAGGGAGGGATGGAGACTCGATGGAGTGGTGTGATTCTCCGGCGAATGTTTATGACGAGGCCTTGCCGGAAAAAGGAGGTGGCGCCGGAAACCGGTGGCCTCAAGCAGAGACACTCACGCTGTTGAAAATTCGGTCGGAGATGGATGCTCAATTTAGAGATGCAAACCCTAAGGGACCTCTTTGGGAAATCGTTTCTAGGAAACTTGAACAACTGGGGTACCACAGAGACTCTAAAAAGTGTAAAGAGAAATTCAAAAACATTTACAAGTATTACAAGAGAAGTAAAGAAAGACTAGTGAGAGTGAGCCCTTATAAGTTCTTCAGCGAGCTCGTAGCTTTAGATAATCAGAACAATGGCAACTCAATTGCTGAAACTGGATTATCGGACAACACTAGAATCGCAACCCCTGACACTGTTGAAATCCCAAATCAACTGGTTAGTTTTCAGACCAGCTCAACTGATTTCTTGTCAGAATTCAGTTCTGATGATGATGAATTGAATGAGGACATTGAGGAACCTGTGAATCAGAAGAGAAAGAGGGAAACTGGTAAAAAATTTGAGATTTTCCTGGAGAATTTGATGAAGAAAGTGATGAAGAAACAAGAGGAGATGCATAAACAGTTGATGGAGATAATAGAGAAGAGGGAGAAGGATAGGATTATTAGAGAAGAAGCTTGGAGGCAGCAGGAGATGGAGAGGGTGAAAAGGGATAAGGAGATGAGAGCCCAAGAGACTTCTCGCAGCCTAGCTCTCATCTCCTTCATCGGAAACGTCTTGGGCCAGCAAATCCACATTCCACAATCTCCGGAACCCCCTTACCCTGACGAAGATCATGAAGAGAAACACGATCAGACCGAATATAAGTTTGATTCAAGCAACCAAAGATGGCCGAAATCTGAAGTACAAGCTCTTATCACACTTCGAACCACGATGGAACATAAGTTTCGGAGTGTAGAAAAGAAGGGTCCTGTATGGGAAGAGATATCTCTTGCAATGTCTTCATTGGGTTATAGTCGGAGTGCGAAGAAGTGTAAAGAGAAATGGGAGAATATCAACAAATACTTCAAGAGAGCAATGGTGTGTGGCAAGAAGCGGCCAGAAAATACTAAGACGTGCCCATATTTCTGCGAATTGAATATCTTGTACAGAAATGGACTCATAAATCTGGGAAACACCCCTAATGAAACGAACGAAGTGGGTGACGACAATCGTTTATCAATGCCAAAGACCTTGAAGCCAGTGAAAGTTCATTCCGATAGCTCCCCAGAGTTCGATAATGTTATCCATTCATCTAATATCTGA 1605 0.4442 MKLTDLPDEISPFPDAGNLLYGHRTSPKIEFGSQFPLQKLRPIRSNGGDLADYPDSRANFGSGELPENGSLAGNLLYGHRMAVTASPNIELRSQVMPLQIKGRDGDSMEWCDSPANVYDEALPEKGGGAGNRWPQAETLTLLKIRSEMDAQFRDANPKGPLWEIVSRKLEQLGYHRDSKKCKEKFKNIYKYYKRSKERLVRVSPYKFFSELVALDNQNNGNSIAETGLSDNTRIATPDTVEIPNQLVSFQTSSTDFLSEFSSDDDELNEDIEEPVNQKRKRETGKKFEIFLENLMKKVMKKQEEMHKQLMEIIEKREKDRIIREEAWRQQEMERVKRDKEMRAQETSRSLALISFIGNVLGQQIHIPQSPEPPYPDEDHEEKHDQTEYKFDSSNQRWPKSEVQALITLRTTMEHKFRSVEKKGPVWEEISLAMSSLGYSRSAKKCKEKWENINKYFKRAMVCGKKRPENTKTCPYFCELNILYRNGLINLGNTPNETNEVGDDNRLSMPKTLKPVKVHSDSSPEFDNVIHSSNI* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00205 534 SMART sant 393 455 IPR001005 -
Eupl06g00205 534 SMART sant 129 191 IPR001005 -
Eupl06g00205 534 Coils Coil 291 319 - -
Eupl06g00205 534 PANTHER FI21293P1 124 500 - -
Eupl06g00205 534 ProSiteProfiles Myb-like domain profile. 131 189 IPR001005 -
Eupl06g00205 534 CDD GT1 396 459 - -
Eupl06g00205 534 MobiDBLite consensus disorder prediction 515 534 - -
Eupl06g00205 534 FunFam Trihelix transcription factor GT-2 133 194 - -
Eupl06g00205 534 ProSiteProfiles Myb-like domain profile. 389 453 IPR001005 -
Eupl06g00205 534 FunFam Trihelix transcription factor GT-2 397 458 - -
Eupl06g00205 534 CDD GT1 131 196 - -
Eupl06g00205 534 Gene3D - 133 194 - -
Eupl06g00205 534 Gene3D - 397 458 - -
Eupl06g00205 534 Pfam Myb/SANT-like DNA-binding domain 395 480 IPR044822 -
Eupl06g00205 534 Pfam Myb/SANT-like DNA-binding domain 131 213 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00205 Eupl-Chr6 3290628 3293384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00205 124 483 Trihelix Transcription Factor Family AT1G76890 32.522 7.07e-60 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl06g00205 Myb_DNA-bind_4 4.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00205 - - nnu:104587882 578.17