Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00200 ATGCTAACTTCAACTGACAACATGAATTCACCTCCAAGAAAGCTTCTTCTCTTCTCTTTTTTCTATTTCTTTGGGTTTCCGATTGTTCCATCAACGTTCGCGGAGAATTTGAGGTTCGATTTCCCTTCTTTCACTCCCCGGGATCTCACTTTTCTCGGCGATTCCTACACCAGGAATGGTGTTATCGGACTTACCAGTGAGTTCGGTGTCCCCTCTTCTAGCTCCGGCAGCGTTATCTCCAACTACCCTGTCACCTTCTTCGATCCCAACACAGACATCTCAGCTTCTTTCTGGACGAGATTCTCTTTCTCGATCACCAACATCTATCCGGGATCATACGGTGATGGGCTGGCGTTCTTTCTATCTCCTGATAACCAGACCCTCGGAAGCTCAGGTGGGTATCTGGGTCTTGTTGATTCATCCCGACTGACCAAGAACAAGTTTATTGCAATAGAATTCGACACCCGTTTGGATTCCCTATTTGATGACCCAAATGATAACCACATTGGACTAGATATCGACAGTCTCACTTCAGTCATGACGGCAGATCCTGCCTCACGTGGGATTGATCTCAAGAGCGGGAATCTGATCACGGTCTGGATCGATTACGACAATGATCAGAAGATGTTGAATGTCTGGATGAGTTACTCGAGCTTCAAGCCTGAGAGGCCAATTCTGTCTGTGGAGATCGACCTCTCGAAGTTTTTCAAGGAGTTTATGTTTGTGGGGTTCTCGGCGTCGAAGGAGTGGAGCACCGAGCACCACCTGATTGAGGAGTGGACCTTTCAGACTTTTGGATATCCCCTCGTGAAACCACAATCTCAGTCTTGTAATGTATCTGATAATTCTTTGATTGAAATTCCAGAGATTACCGTCTCTGATTCTAGCTACAAGACCTACAAGAAGCTTACTTTAGGCCTAGGGATTGGTGGTCCAGCCTTTTTTTGTGTAGTTTTCATGGTGATCGGTTGGATTTTTGTTAAGAAATGGAGGGAAACCAGAACAGATGATAGCTTCAGATCAGAGCTTCTGAAAGGCCCAAGACAATTCAGTTACAGAGAGCTAAAATTTGCCACAAAAGGGTTTCATTCCAGTCGAATTTTAGGCCATGGAGCCTTCGGGACAGTTTACAAAGCCATTTTTCCCACTTCAGATGTTACTTTCGTTGTGAAAGTATCGAAACATACTAATAATGGTAAAACCGAATTCCTTGCCAAACTGTCCATAATGGCTTGTATGCGACACAGAAATCTAGTTCCGCTTCAGGGTTGGTGTGCTGAGAAAAGTGAATTGCTGCTTGTTTATGAGTTCATGCCCAATGGGAGCCTCGATAAGGTCCTATACCAAGAACCCAAAGAGGGGATCTGGCTACAATGGTCTCAGAGGTATAACATCGCAGTGGGGATCGCTTCTGTTCTGGCCTACCTACACCAAGAATGCGAACAGCAAGTCATTCACAGAGACATAAAGACCAGCAATATAATGTTGGATAGAGACTTCAATCCAAGGTTGGGAGGTTTCGGACTAGCAAGGCTCATGAAGGACGACAACAGTCCTGTTTCGACTCTGACCGCTGAAGCAATGGGATACCTTGCCCCTGAGTATCTCCTGTATGGGAAAGCAACAGAAAAAACAGATGTTTTCAGTTTTGGTGTGGTTATGCTTGAAGTGGCTTGTGGGAAGAGGCCCGTTGATGAAGAAACAAATAGCGAAAAAATGTTTAATTTGGTAGATTGGGTTTGGGGTTTGCATTCTGAAGGTAACCTTGTCGAAGCAGCGGACAAGAGGTTGAATGGGAAATTTAAGGAGGAAGAAATGATGAAGCTGTTGCTGGTGGGTCTGAGCTGTGTGAACCCGGCGTGCACAGAGAGGCCTTCTATGAGGAGGGTCCTCCAGATCCTTAATGATGAGGCAGAGCTTCTAGCAGTACCAAAGATGAAACCTAGGCTCACATTCTCTTATAGCTTGTCATCGAGCCAGGAGGATATTGTTTATGAGTGTGATAAATGTTGGACACCCAGCCCCTTGAATGTGATAAGAAAAGCAAAAGAGATTTTCCAGAAGAAAGCTTGTGAGTTAACGACAACAAATTCTGAAGCACAGGAGGTCACACAAGGTTGCGAGCAATATACTTTGGACTTTCCAAGTCAGGGAGCACATCTCTGCTGA 2169 0.4514 MLTSTDNMNSPPRKLLLFSFFYFFGFPIVPSTFAENLRFDFPSFTPRDLTFLGDSYTRNGVIGLTSEFGVPSSSSGSVISNYPVTFFDPNTDISASFWTRFSFSITNIYPGSYGDGLAFFLSPDNQTLGSSGGYLGLVDSSRLTKNKFIAIEFDTRLDSLFDDPNDNHIGLDIDSLTSVMTADPASRGIDLKSGNLITVWIDYDNDQKMLNVWMSYSSFKPERPILSVEIDLSKFFKEFMFVGFSASKEWSTEHHLIEEWTFQTFGYPLVKPQSQSCNVSDNSLIEIPEITVSDSSYKTYKKLTLGLGIGGPAFFCVVFMVIGWIFVKKWRETRTDDSFRSELLKGPRQFSYRELKFATKGFHSSRILGHGAFGTVYKAIFPTSDVTFVVKVSKHTNNGKTEFLAKLSIMACMRHRNLVPLQGWCAEKSELLLVYEFMPNGSLDKVLYQEPKEGIWLQWSQRYNIAVGIASVLAYLHQECEQQVIHRDIKTSNIMLDRDFNPRLGGFGLARLMKDDNSPVSTLTAEAMGYLAPEYLLYGKATEKTDVFSFGVVMLEVACGKRPVDEETNSEKMFNLVDWVWGLHSEGNLVEAADKRLNGKFKEEEMMKLLLVGLSCVNPACTERPSMRRVLQILNDEAELLAVPKMKPRLTFSYSLSSSQEDIVYECDKCWTPSPLNVIRKAKEIFQKKACELTTTNSEAQEVTQGCEQYTLDFPSQGAHLC* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00200 722 Gene3D Transferase(Phosphotransferase) domain 1 438 646 - -
Eupl06g00200 722 ProSitePatterns Protein kinases ATP-binding region signature. 368 391 IPR017441 GO:0005524
Eupl06g00200 722 CDD lectin_legume_LecRK_Arcelin_ConA 37 266 IPR001220 GO:0030246
Eupl06g00200 722 SUPERFAMILY Protein kinase-like (PK-like) 337 634 IPR011009 -
Eupl06g00200 722 ProSiteProfiles Protein kinase domain profile. 362 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00200 722 FunFam L-type lectin-domain containing receptor kinase VIII.1 35 275 - -
Eupl06g00200 722 Gene3D Phosphorylase Kinase; domain 1 325 437 - -
Eupl06g00200 722 Gene3D - 34 277 - -
Eupl06g00200 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Eupl06g00200 722 FunFam L-type lectin-domain containing receptor kinase VIII.1 438 652 - -
Eupl06g00200 722 PANTHER - 58 644 - -
Eupl06g00200 722 CDD STKc_IRAK 368 635 - -
Eupl06g00200 722 Pfam Protein kinase domain 362 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00200 722 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 267 IPR013320 -
Eupl06g00200 722 Pfam Legume lectin domain 37 264 IPR001220 GO:0030246
Eupl06g00200 722 SMART serkin_6 362 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00200 Eupl-Chr6 3203945 3206555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00200 13 666 Receptor kinase-like Gene Family AT5G55830 59.370 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Eupl06g00200 Pkinase 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00200 - - nnu:104594259 973