Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00199 ATGGGGGAGACTATTGGGCTGGTAAAAGTGATTGTACTGCAAGGGAAAAAGCTGGTAGTTCGGGATTTCAGGACGAGCGATCCTTATGTCGTGGTCAAGCTGGGTAATCAGACTGCAAAGACCAAGGTTATTAACAGTTGCCTTAATCCCGTTTGGAATGAAGAGTTAACCTTCTCCGTTACAGAACCTGTTGGAGTTCTAAACTTGGTACGTTCTTCATGTTTGAACATGTTTTCCCCATGCTATATAATGCTGTTTATATCATACATGTTCCCAAAAAAAATTGTATTATTTTAA 297 0.3973 MGETIGLVKVIVLQGKKLVVRDFRTSDPYVVVKLGNQTAKTKVINSCLNPVWNEELTFSVTEPVGVLNLVRSSCLNMFSPCYIMLFISYMFPKKIVLF* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00199 98 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 69 IPR035892 -
Eupl06g00199 98 SMART C2_3c 7 98 IPR000008 -
Eupl06g00199 98 Gene3D C2 domain 1 77 IPR035892 -
Eupl06g00199 98 ProSiteProfiles C2 domain profile. 1 98 IPR000008 -
Eupl06g00199 98 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 1 69 IPR044518 GO:0005096|GO:0005543
Eupl06g00199 98 Pfam C2 domain 7 67 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00199 Eupl-Chr6 3195475 3197240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00199 1 69 C2H2 Transcription Factor Family AT4G05330 53.623 2.99e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00199 - - mnt:21393911 127.487