Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00186 ATGCGGAAATCCTCAAAAAGGCCGAAAACAGATGGAGTTCAAAGTCAAACAATTCAACGTCTGACCAAAGAACAGGAGATGTCTATCATGGTCGACGCTCTCAAGCACGTCTTTTCCGGCATTGATGGTGTTGGCCACATTGCTGAACTATTCCGGCTATCTACAGCCGTCAAAAGTGCCAGCACATTTTCACCTGCGGCTAGTAGCGCCAGCACAGACCAAGGAGCAATAGTTTTTCTCCTCCCTGATGCTGAAACGTGCCAATTCTGTAAAATAGACGGTTGTCTAGGGTGCAATCTTTTCGAGCCACCCCAAGTTGAGAATTCGAGGAGGAAGAAGAAGAATAGTTACCGGGGTGTTCGACAGAGACCGTGGGGAAAATGGGTAGCTGAAATCAGTGACCCTCGAATTCCAGCTCGGAAATGGCTCGGCACCTTCAATACCGCAGAAGAAGCTGCTCTGGCATACGATAGGGAAGCCATTAAGTGTCGTGGGTCCCGGGCGAAACTCAACTTCCCGTTACCGAATCAAAATTTCCTACCCCAACAGCAGCTGCAGCAGCATAAGCAGCAGCCGCAGAAGGATAAGGTGAAAGCAGAATTCGAGAAACCAGGCAATGATCTGCCGGTGCATTTTGACTCGCAGACGGAGACGGTGGTGGTGGCATCAGAAACCAGGAATCAACAGCAGCAGAAGCAGCAGCAGGAGGAGAAGGATAAGGTGCAACCAGAAGTCGAGAAACCAGGAAAACTTGAAGAAATAGCCATTGAAGCAAACTTGTTCACTAATGTTAACCAGTGCAGGTAG 807 0.4907 MRKSSKRPKTDGVQSQTIQRLTKEQEMSIMVDALKHVFSGIDGVGHIAELFRLSTAVKSASTFSPAASSASTDQGAIVFLLPDAETCQFCKIDGCLGCNLFEPPQVENSRRKKKNSYRGVRQRPWGKWVAEISDPRIPARKWLGTFNTAEEAALAYDREAIKCRGSRAKLNFPLPNQNFLPQQQLQQHKQQPQKDKVKAEFEKPGNDLPVHFDSQTETVVVASETRNQQQQKQQQEEKDKVQPEVEKPGKLEEIAIEANLFTNVNQCR* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00186 268 PRINTS Ethylene responsive element binding protein signature 117 128 IPR001471 GO:0003700|GO:0006355
Eupl06g00186 268 PRINTS Ethylene responsive element binding protein signature 139 155 IPR001471 GO:0003700|GO:0006355
Eupl06g00186 268 FunFam Ethylene-responsive transcription factor 2 115 174 - -
Eupl06g00186 268 PANTHER DNA-BINDING DOMAIN 72 239 IPR044808 GO:0003700|GO:0009873
Eupl06g00186 268 MobiDBLite consensus disorder prediction 183 249 - -
Eupl06g00186 268 SUPERFAMILY DNA-binding domain 116 174 IPR016177 GO:0003677
Eupl06g00186 268 MobiDBLite consensus disorder prediction 231 249 - -
Eupl06g00186 268 CDD AP2 117 173 IPR001471 GO:0003700|GO:0006355
Eupl06g00186 268 ProSiteProfiles AP2/ERF domain profile. 116 173 IPR001471 GO:0003700|GO:0006355
Eupl06g00186 268 SMART rav1_2 116 179 IPR001471 GO:0003700|GO:0006355
Eupl06g00186 268 Gene3D AP2/ERF domain 116 174 IPR036955 GO:0003700|GO:0006355
Eupl06g00186 268 MobiDBLite consensus disorder prediction 211 230 - -
Eupl06g00186 268 MobiDBLite consensus disorder prediction 191 207 - -
Eupl06g00186 268 Pfam AP2 domain 116 165 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00186 Eupl-Chr6 2903483 2911333 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00186 19 174 AP2-EREBP Transcription Factor Family AT4G34410 38.542 5.40e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl06g00186 AP2 1.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00186 - - rvl:131326918 166.007