Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00185 ATGCGGAAATCCTCAAAAAGGCCGAAAGCAGATGGAGTTCAAAGTCAAACAATTCAACGTCTGACCAAAGAACAGGAGATGTCAATCTTGGTCGACGCTCTCAAGCACGTCGTTTCCGGCATTGATCGTGTTGGCCACATTGCTGTACTATTCCGGCTATCTACAGCCGTCAAAAGTGCCAGCACATTTTCACCTGCGGCTAGTAGCTCCGGCACTGACCAAGGAGCAATAGTTTTTCTCCTCCCTGATGCTGAAAAGTGTCAATTCTGTAGAATAGACGGTTGTCTAGGGTGCAATCTTTTCGAGCCAGCCCAAGTTGAGAATTCGAGGAGGAAGAAGAAGAATAGTTACCGGGGTGTTCGACAGAGATCGTGGGGAAAATGGGTAGCTGAAATCAGTGACCCTCGAGTTCCAGCTCGGAAATGGCTCGGCACGTTCAATACCGCAGAAGAAGCTGCTCTGGCATACGATAAGGAAGCCATTAAGTGGCGAAACTCAACTTCCCGTTACCGAATCAAAATTTCCAACCCCAACAGCAGCAGCAGAAGCATAAGGTGA 558 0.4839 MRKSSKRPKADGVQSQTIQRLTKEQEMSILVDALKHVVSGIDRVGHIAVLFRLSTAVKSASTFSPAASSSGTDQGAIVFLLPDAEKCQFCRIDGCLGCNLFEPAQVENSRRKKKNSYRGVRQRSWGKWVAEISDPRVPARKWLGTFNTAEEAALAYDKEAIKWRNSTSRYRIKISNPNSSSRSIR* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00185 185 PRINTS Ethylene responsive element binding protein signature 117 128 IPR001471 GO:0003700|GO:0006355
Eupl06g00185 185 PRINTS Ethylene responsive element binding protein signature 139 155 IPR001471 GO:0003700|GO:0006355
Eupl06g00185 185 SMART rav1_2 116 179 IPR001471 GO:0003700|GO:0006355
Eupl06g00185 185 SUPERFAMILY DNA-binding domain 116 169 IPR016177 GO:0003677
Eupl06g00185 185 PANTHER DNA-BINDING DOMAIN 70 167 IPR044808 GO:0003700|GO:0009873
Eupl06g00185 185 Gene3D AP2/ERF domain 116 182 IPR036955 GO:0003700|GO:0006355
Eupl06g00185 185 Pfam AP2 domain 116 161 IPR001471 GO:0003700|GO:0006355
Eupl06g00185 185 CDD AP2 117 170 IPR001471 GO:0003700|GO:0006355
Eupl06g00185 185 ProSiteProfiles AP2/ERF domain profile. 116 177 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00185 Eupl-Chr6 2899915 2900573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00185 19 183 AP2-EREBP Transcription Factor Family AT4G34410 32.836 3.57e-23 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl06g00185 AP2 1.6e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00185 - - zju:107427051 152.91