Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00184 ATGGCCTCGAAAGCTGGTGGTCGAGCTTGCTCGGAACAGCAGCAGAAAACAGGTAGTAGTCAAACAGTGGAGGCAAATTCTCGCAGGCCTTCACCTTTGCAAGTTCCAAAGACAACAAGCAAGTCAGAGCCGGCTACCCCAAAAAAATTACCAAGATTTGTGCAACAGGTTGTGGAAAAGGAGGTTACTGCAGAAACCTCCGAGGACCAAAAAACACCAAATTCTCTTCAAAAGGGATCTGCTGATCCTTTATCCGATAAGTTAGGTTTAAAATTTTCCTTGGGAGGACTGAAACAATCACAAACACAAGTAGATCCTGCAGTAAATGAGACTAGGGGCTCATTAGAAAGCGGTGGGGATCAAGAAAAGAAAACATCCGAGCATGGTAGCGTGAAGGATAGCTCAGCTTCCGCTAAAGTTAGCGATGGGACCAGCAATTTCACCAAGACTAGTGGAAGTGCCAAGATCAGTGATCGTATTGATTTTGTTGAGAGTGGCAAGAGTAGTATATGTAGAGGAAGCACAAGCAGTGACGTTAGTGACGAGAGTACATGTAGCAGCATAAGTAGCAGTATCAGCAAGCCTCACAAAGCGAATGATATGAGATGGGAAGCGATTCAGGCTGTCCGAGCTAAAGATGGGGGCTTGGGTTTGAGCCATTTCAGACTACTTAAGAGGTTGGGATGTGGGGACATAGGGAGTGTCTATCTGTCAGAATTGAGTGGGACCAAGAGTTATTTTGCGATGAAGGTTATGGACAAGGGGTCTCTAGCAAACCGCAAGAAGCTACTTCGAGCTCAGACAGAAAGAGAGATACTACAGTCCCTGGACCATCCATTCCTTCCAACATTATATACGCACTTTGAGACAGACAAATTCTCATGTTTGGTGATGGAGTTCTGCCCAGGAGGAGACTTGCACACCCTTCGGCAGAAGCAGCCAGGGAAACATTTTACTGAACAGGCAGTGAAGTTTTATGTAGCAGAGGTCCTCCTTGCTTTGGAGTACCTACACATGCTTGGGATTGTCTACCGCGACCTCAAGCCAGAAAATGTCCTTGTGAGAGAAGACGGACACATAATGCTCTCTGACTTCGACCTCTCCCTTCGATGTGCAGTCATCCCAACTCTGGTCAAGTCCTCGTCCCTTGAGTCTGAACCATTTAGGAGGAATCCTGTTTATTGTGTCCAACCAGCTTGCATTGAGCCTTCCTGTATCCAGCCATCCTGCGTAGCCCCCACGACATGCTTCTCCCCTCGACTCTTTTCCAGCAAATCCAAGAAGGACCGGAAACCCAAAAATGAGATTGGAAACCAAGTCAGCCCATTGCCTGAGCTCATGGCTGAGCCAACAGGGGCCCGGTCTATGTCATTTGTCGGGACTCATGAATACCTGGCACCCGAGATCATCAAAGGCGAAGGCCATGGGAGTGCCGTAGATTGGTGGACTTTCGGGATCTTTCTATATGAGCTATTGTTTGGTAAAACTCCTTTCAAGGGATCAGGGAATCGGGCCACATTGTTCAATGTCGTGGGTCAGCCGTTGCGGTTCCCAGAGTCACCATTCGTTAGTTTCTCAGCAAGGGATCTGATAAGGGGCCTGCTTGTAAAGGAGCCACAGCATCGTTTGGCTTACAAGCGTGGGGCAACGGAGATAAAGCAACACCCATTTTTCGAAGGTGTGAACTGGGCTTTGATACGTTGTGCAAGCCCACCTGAGATTCCAAAACCAGTTGAGATCGAACGGATCCCGGTCCCAACAGCATCAACAAGTGAAAAGGCTGCAGCTGCCACCCCCGATCAGAAAAGTTCCGATAATTATCTCGAGTTTGATTTCTTTTAG 1842 0.4788 MASKAGGRACSEQQQKTGSSQTVEANSRRPSPLQVPKTTSKSEPATPKKLPRFVQQVVEKEVTAETSEDQKTPNSLQKGSADPLSDKLGLKFSLGGLKQSQTQVDPAVNETRGSLESGGDQEKKTSEHGSVKDSSASAKVSDGTSNFTKTSGSAKISDRIDFVESGKSSICRGSTSSDVSDESTCSSISSSISKPHKANDMRWEAIQAVRAKDGGLGLSHFRLLKRLGCGDIGSVYLSELSGTKSYFAMKVMDKGSLANRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQKQPGKHFTEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVIPTLVKSSSLESEPFRRNPVYCVQPACIEPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELMAEPTGARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPFVSFSARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCASPPEIPKPVEIERIPVPTASTSEKAAAATPDQKSSDNYLEFDFF* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00184 613 SUPERFAMILY Protein kinase-like (PK-like) 195 589 IPR011009 -
Eupl06g00184 613 SMART serkin_6 221 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00184 613 Gene3D Transferase(Phosphotransferase) domain 1 453 576 - -
Eupl06g00184 613 Gene3D Phosphorylase Kinase; domain 1 219 304 - -
Eupl06g00184 613 FunFam Serine/threonine-protein kinase AGC1-7 451 576 - -
Eupl06g00184 613 MobiDBLite consensus disorder prediction 8 45 - -
Eupl06g00184 613 MobiDBLite consensus disorder prediction 591 605 - -
Eupl06g00184 613 FunFam serine/threonine-protein kinase D6PK-like 305 372 - -
Eupl06g00184 613 Gene3D Transferase(Phosphotransferase) domain 1 305 371 - -
Eupl06g00184 613 MobiDBLite consensus disorder prediction 131 152 - -
Eupl06g00184 613 CDD STKc_phototropin_like 219 581 - -
Eupl06g00184 613 MobiDBLite consensus disorder prediction 168 193 - -
Eupl06g00184 613 MobiDBLite consensus disorder prediction 589 613 - -
Eupl06g00184 613 MobiDBLite consensus disorder prediction 1 152 - -
Eupl06g00184 613 PANTHER FLIPPASE KINASE 1-RELATED 29 581 - -
Eupl06g00184 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 342 354 IPR008271 GO:0004672|GO:0006468
Eupl06g00184 613 MobiDBLite consensus disorder prediction 424 444 - -
Eupl06g00184 613 MobiDBLite consensus disorder prediction 95 110 - -
Eupl06g00184 613 Pfam Protein kinase domain 455 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00184 613 Pfam Protein kinase domain 222 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00184 613 MobiDBLite consensus disorder prediction 116 130 - -
Eupl06g00184 613 FunFam Serine/threonine-protein kinase D6PK-like 219 304 - -
Eupl06g00184 613 ProSiteProfiles Protein kinase domain profile. 221 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00184 Eupl-Chr6 2876555 2883269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00184 51 613 AGC Kinase Gene Family AT5G47750 76.720 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl06g00184 Pkinase 2.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00184 K08286 - vvi:100258297 993.801