Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl06g00173 | ATGGGTTCGAAATCGAAGGAAAACAATTCAAAGACCTCTGTGGGAGAGGGAGCGAGTCCTGGAAAGATTTTCATCGGAGGACTCCATAAGGATACGAGCTTAGCTACATTCACAAAATATTTCGGAAAATATGGAGAGATAACGGATTCGGTGATAATGAAAGATCGGTACACTGGGCAACCGAGGGGTTTTGGTTTTATAACCTATGCCGACCCTTCAGTTGTTGACAAAGTTATTGAAGAAACCCATGTCATCAATGGAAAACAAGTTGAAATTAAAAGAACCATTCCAAAAGGCTCTGTACAATCTAAAGATTTCAAAACAAAGAAGATCTTTGTTGGTGGGGTTCCGTCAACAATCACTGAAGATGAGTTCAAGAATTTCTTCTCCAAGTACGGGAAGGTGGTGGAGAACCAGATCATACGAGATCATGCAACCAACCGCTCTCGAGGGTTCGGCTTTATAATCTTTGATAGTGAACAAGTTGTAGATGATATGTTAGCCGAAGGAAATATGATTGATATGGCGGGTACCCAGGTGGAGATCAAGAAGGCTGAACCAAAGAAAGCCTCAAATCAACCACCTGCTCCTGCATTTGGTAGTGACTCTAGGGCTCATTCTTTCGGTGATGGTCTTGGTGGTTTTGGTGACTCTTATAGTGGTTTTGGCGGCAGTGGGTTCGGCCCTGCTCCCTATAGGACACCAGGAGGTCTTGCAAGTAGGCTTGGTGGTTACGGTGGGTATGGTGGTAGTGGCAGCGAATTTGGTAGTGGTTATGGGGGTTTTGGCAGCAGTGACTTAGGTGGTTACCGTGGAGAATCTTCCCTTGGTTACACTAGTCGCCTTGGACCATATGGCGGAGGCTTTGGTGGGGGATATGGGGGAAGTGGATTAGGTGGTTATGGCCGAGGAGGTGAAGGCTATGGAAGTTACGGTTCAGGTTATGGTGGTGGTTATGATTCTGGCCCTGGTGCCAGTTATGGTGGAGCAGGCGGGTTGTATGGAAGTAGAGCAGGTTATGGCAGTAGTCGGTACCATCCTTACGGAAGGTAG | 1053 | 0.4663 | MGSKSKENNSKTSVGEGASPGKIFIGGLHKDTSLATFTKYFGKYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEETHVINGKQVEIKRTIPKGSVQSKDFKTKKIFVGGVPSTITEDEFKNFFSKYGKVVENQIIRDHATNRSRGFGFIIFDSEQVVDDMLAEGNMIDMAGTQVEIKKAEPKKASNQPPAPAFGSDSRAHSFGDGLGGFGDSYSGFGGSGFGPAPYRTPGGLASRLGGYGGYGGSGSEFGSGYGGFGSSDLGGYRGESSLGYTSRLGPYGGGFGGGYGGSGLGGYGRGGEGYGSYGSGYGGGYDSGPGASYGGAGGLYGSRAGYGSSRYHPYGR* | 351 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl06g00173 | 350 | FunFam | Heterogeneous nuclear ribonucleoprotein 1 | 20 | 101 | - | - | |
Eupl06g00173 | 350 | SUPERFAMILY | RNA-binding domain, RBD | 19 | 100 | IPR035979 | GO:0003676 | |
Eupl06g00173 | 350 | Gene3D | - | 21 | 98 | IPR012677 | - | |
Eupl06g00173 | 350 | PANTHER | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN | 5 | 350 | - | - | |
Eupl06g00173 | 350 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 21 | 97 | IPR000504 | GO:0003723 | |
Eupl06g00173 | 350 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 111 | 171 | IPR000504 | GO:0003723 | |
Eupl06g00173 | 350 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 23 | 84 | IPR000504 | GO:0003723 | |
Eupl06g00173 | 350 | Gene3D | - | 99 | 228 | IPR012677 | - | |
Eupl06g00173 | 350 | SMART | rrm1_1 | 22 | 93 | IPR000504 | GO:0003723 | |
Eupl06g00173 | 350 | SMART | rrm1_1 | 110 | 183 | IPR000504 | GO:0003723 | |
Eupl06g00173 | 350 | SUPERFAMILY | RNA-binding domain, RBD | 97 | 195 | IPR035979 | GO:0003676 | |
Eupl06g00173 | 350 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 109 | 187 | IPR000504 | GO:0003723 | |
Eupl06g00173 | 350 | FunFam | Heterogeneous nuclear ribonucleoprotein 1 | 102 | 227 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl06g00173 | Eupl-Chr6 | 2699675 | 2702155 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl06g00173 | 23 | 193 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 23.158 | 1.72e-10 | 60.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl06g00173 | K12741 | - | nnu:104594284 | 418.698 |