Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00167 ATGGATTTTGAAAGAGAGAGAGAGATTGGGAGAGTGGAAGAAGGGGAGGAGATGTCTTTGTCCCCTCCAACCATGGGGACTATGCAAATTGCTGGAAGCAATGGCTTTGGTCACAACATAGAGTTCATGTCTCAAGCATATATGAGAAACAGCAGGAACTCAGAGATAGATATAGAAGATGAATGTTCAAACGCCATCAAGGATGGTCCTCTTCCAATATTTCTCAAGTTTGAAGATGTGGACTATAAGGTGAGAACCAGTCAGGCTTCCTGTGAGAACCCTTTGAAGGCTATGATGGGGGCATCAGAGTTGAACATGGAGCAAGAGAATCAGAAACACATCTTGAAAGGTATAACAGGAAGCATAGGTCCTGGAGAAATCCTTGCTTTGATGGGACCTTCTGGTAGCGGGAAGACAACCTTGCTCAAGATAATAGGAGGTAGATTGCAGGAAAATGTAAAAGGGACCATCACTTACAATGACATTCCATATAATCCAGCTCTTAAGAGGAGGATTGGATTTGTGACGCAAGATGATGTGCTCTTCCCTCAACTAACAGTGGAAGAAACCCTGGTTTTCGCCGCATTTCTGAGACTTCCCGGCAACATGAGCCGACAACAGAAGTATTCAAGAGTAGAGATGATTGTGAAAGAATTAGGCCTTGAAAGATGTCGCCATACAAGAATAGGAGGATCATTTGTGAAGGGAATATCTGGAGGTGAAAGAAAAAGAACTAGTATAGGTTATGAAATTCTTGTAGATCCGTCGTTACTGTTGCTCGATGAACCCACTTCAGGCCTTGATTCCACCTCTGCAAATAAACTCCTTCGGATTCTTCAAGGAATTGCCAAGGCAGGAAGGACGATCATCACGACAATCCATCAGCCTTCAAGCAGGATGTTCCACATGTTTGACAAGCTTTTGCTGTTATCAGAAGGTTATCCTCTGTATTATGGGAAGGCTAATGAGTCCATGGAGTATTTTTCATCTTTAAGGTTTGTCCCTGAGATAGCCATGAACCCTGCTGAGTTCCTGCTAGATTTAGCAACTGGACACGTTAATGACATATGCATCCCGGAAGATTTAACGGCACCCCACGGCACTCCTGAATTCGAGAGAGATGTAGTTAAATACTTACAATTGAAGTACAAAGTTGAGTTAGAACGGAAAGAGAAAGAAGAGAATCATGGAACGACGAAGACTCCAAAGCATCTTCAGTTATCTGTTCAAGTTAAGAAGGATTGGACCATGAGTTGGTGGGAGCAGTTCGTGATATTATCAAAGAGAACGTTTAAAGAGAGATGTAGAGATTACTTTGACAAGCTAAGACTAGTGCAAGCTCTTGGTGTTGCAGTCTTATTAGGTCTTCTTTGGTGGAAATCCAAGACTGGAACTGAAGCCCAACTTCGAGATCAGGTAGTTGGCCTAATGTTCTACATTTGCATTTTCTGGACATCTTCGTCGATATTCGGAGCCGTATATGTTTTCCCATTTGAGAAGGCCTACTTGGTGAAAGAAAGGAAAGCAGACATGTACAGGCTTAGCGTATACTATGCGTCGAGCACTCTATGTGACATGGTGGCTCATATTTTCTATCCCACATTTTTCATGCTCATTATATACTTCATGGCTGGCTTCAAGAGAACAGTTCCTTGCTTCTTCTCCACATTATTCACAATATTATTGATAGTCATTACAAGCCAAGGAGCGGGGGAACTTTTCGGTGCCGCAGTTCTAAGTATAAAAAGAGCTGGAATGATTGCCTCTATGATACTAATGTTGTTTCTCCTCACTGGAGGATATTATGTCCAGCATATACCAGAATTCATGCAGTGGATAAAGTACATATCGTTCATGTATTATGGGTTTCGCCTTCTTTTGAAAGTGCAATATTCCGGAGACGAATTATATGAGTGTGGAAGCAAAGGCGGATGCCGAAGTTTGCAGAGTTCACCCTCTTTTGATACAGTAAACTTGAATGGTGGGTTGAAAGAAGTCTGGGTTCTGCTCGCCATGGCTCTAGCTTATCGATTATGCGCGTATTTTTGCCTTCGTAGAAAAATAAACATTTGCCATCTTTGA 2082 0.4222 MDFEREREIGRVEEGEEMSLSPPTMGTMQIAGSNGFGHNIEFMSQAYMRNSRNSEIDIEDECSNAIKDGPLPIFLKFEDVDYKVRTSQASCENPLKAMMGASELNMEQENQKHILKGITGSIGPGEILALMGPSGSGKTTLLKIIGGRLQENVKGTITYNDIPYNPALKRRIGFVTQDDVLFPQLTVEETLVFAAFLRLPGNMSRQQKYSRVEMIVKELGLERCRHTRIGGSFVKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLRILQGIAKAGRTIITTIHQPSSRMFHMFDKLLLLSEGYPLYYGKANESMEYFSSLRFVPEIAMNPAEFLLDLATGHVNDICIPEDLTAPHGTPEFERDVVKYLQLKYKVELERKEKEENHGTTKTPKHLQLSVQVKKDWTMSWWEQFVILSKRTFKERCRDYFDKLRLVQALGVAVLLGLLWWKSKTGTEAQLRDQVVGLMFYICIFWTSSSIFGAVYVFPFEKAYLVKERKADMYRLSVYYASSTLCDMVAHIFYPTFFMLIIYFMAGFKRTVPCFFSTLFTILLIVITSQGAGELFGAAVLSIKRAGMIASMILMLFLLTGGYYVQHIPEFMQWIKYISFMYYGFRLLLKVQYSGDELYECGSKGGCRSLQSSPSFDTVNLNGGLKEVWVLLAMALAYRLCAYFCLRRKINICHL* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00167 693 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 337 IPR003439 GO:0005524
Eupl06g00167 693 Pfam ABC-2 type transporter 421 631 IPR013525 GO:0016020|GO:0140359
Eupl06g00167 693 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 53 679 - -
Eupl06g00167 693 MobiDBLite consensus disorder prediction 1 15 - -
Eupl06g00167 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 330 IPR027417 -
Eupl06g00167 693 FunFam ABC transporter G family member 22 102 331 - -
Eupl06g00167 693 Gene3D - 101 332 IPR027417 -
Eupl06g00167 693 Pfam ABC transporter 115 265 IPR003439 GO:0005524
Eupl06g00167 693 SMART AAA_5 124 315 IPR003593 GO:0016887
Eupl06g00167 693 CDD ABCG_EPDR 111 319 - -
Eupl06g00167 693 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00167 Eupl-Chr6 2638143 2641535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00167 114 323 Calmodulin-binding Proteins AT2G36910 28.440 9.23e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00167 K05681 - zju:107416341 1156.74