Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00153 ATGGGTCACCTATGTGATTTCTGTGGGGAGCAAACATCCATGGTATACTGCAGATCTGATGCTGCTTGCCTATGTTTGTCCTGTGACCGTAATGTCCATTCAGCAAATGCCCTTTCTAGGCGCCACTCAAGGACCCTTTTGTGTGAAAGATGCAATTCTCAGCCCGCAACAGTTAGGTGTGTTGAGGAGAAGATCTCACTTTGTCAAAATTGTGATTGGAATGGGCATGGTGGCCCTACGTCATCTTCGGCACATAAGAGGCAGACAATCAACTGTTACTCAGGCTGTCCTTCTGCAGGGGAACTTTCGAGAATCTGGTCATTTGTTCAGGATTTCCCTTCTATGGATGATTCTAATTGTGAGCAGGAAATGGGTTTAATGAGCATCGACGAGAACAATGTCAGTAACTCTTGGGGGCCTCCTGAAAATAATAGCATGGCAGACTTAGCTGGTGCTGCTGGAATGAATGATGTGGAAAATGTGGATAAGTTTGGTATTTGGATGGGATCCTCTTCAATGCCATGCAGTGAGGATCTGCTGGCTCGTTCAGTGGACTCAACCACCCCGAAGCTATGCTGTCCTGGAACAAAAAGCCTTGGACTCTGTGAAGATGATCTTTATGAAGATCTCGATGTGGCTGATGCTGATTTGAATTTTGAGAGCTATGAAGAACTCTTTGGTGTATCCCAGAGTCATTCAGAACAGCTTTTTGAGAATGGTGGACTTGATAGCTTGTTTGGGGTGAAGGACATATCTGCTGTTGATTCCAAATGTCAGGGTGAATTTGTCACAGAGGGGTCTTCGGCTGGAAGGGTTAAAGCGATACAGCCAGCATGCAGCAATGCGGTATCTGCTGATTCCATGATGAGTGCTAAAACTGAACCAAACCTTTGTTACTCTGCAAGGCAAGCCCATTCCAGCCTCTCACTTTCATTTTCTGGCTTGACTGGGGAGAGTAGTGCCGGAGATTATCAAGACTGTGGGGTATCTTCGATGCTTCTTATGGGTGAGCCTCCATGGTATTCACCTGGCACTGAAAACTCATTCCCATCTTCTAGCAGGGACAGCGCTGTCATGCGTTATAAGGAAAAGAAGAAGTCACGCAAGTTTGAGAAGAAAATAAGGTATGTCTCTCGTAAGGCGAGGGCTGATGTAAGAAGGCGTGTGAAGGGACGGTTCGTTAAGGCTGGAGATGCTTATGATTATGACCCATTGTGCCAAACCAGAAGCTACTGA 1236 0.462 MGHLCDFCGEQTSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPATVRCVEEKISLCQNCDWNGHGGPTSSSAHKRQTINCYSGCPSAGELSRIWSFVQDFPSMDDSNCEQEMGLMSIDENNVSNSWGPPENNSMADLAGAAGMNDVENVDKFGIWMGSSSMPCSEDLLARSVDSTTPKLCCPGTKSLGLCEDDLYEDLDVADADLNFESYEELFGVSQSHSEQLFENGGLDSLFGVKDISAVDSKCQGEFVTEGSSAGRVKAIQPACSNAVSADSMMSAKTEPNLCYSARQAHSSLSLSFSGLTGESSAGDYQDCGVSSMLLMGEPPWYSPGTENSFPSSSRDSAVMRYKEKKKSRKFEKKIRYVSRKARADVRRRVKGRFVKAGDAYDYDPLCQTRSY* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00153 411 CDD Bbox1_BBX-like 47 90 - -
Eupl06g00153 411 ProSiteProfiles CCT domain profile. 354 396 IPR010402 GO:0005515
Eupl06g00153 411 CDD Bbox1_BBX-like 4 47 - -
Eupl06g00153 411 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Eupl06g00153 411 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 399 - -
Eupl06g00153 411 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Eupl06g00153 411 SMART bboxneu5 48 90 IPR000315 GO:0008270
Eupl06g00153 411 SMART bboxneu5 1 47 IPR000315 GO:0008270
Eupl06g00153 411 Pfam CCT motif 354 396 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00153 Eupl-Chr6 2476416 2484353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00153 1 411 C2C2-CO-like Transcription Factor Family AT3G07650 53.774 1.22e-147 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Eupl06g00153 CCT 5.1e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00153 - - nnu:104588684 648.662