Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00127 ATGGAGCGCCAAGAAGACGATGGCGACGAAGACGATTACTCTTCAACCTCCACCTCATCTCCGTCGTTCAGATTCCGTTGGGACGTGTTCCTGAGTTTCAGAGGCGAAGACACTCGCCACAACTTCACCCTCCGTCTCTACGAAGAGCTCGTACGCAATGGCATTCGCACCTTCCGTGACGACGACGAATTGGAGAGGGGAGAGGAGATCGCTCCCAGTTTGTTGACGGCCATCGAGGACTCTGCCGCCTCCATCGCCGTCATCTCCGAGAATTACGCCTCGTCAAGGTGGTGCCTTGAAGAGCTGGCCAAGATCTTGGAATGCCGCCGATTGCTACTTCCGGTGTTTTACCAAGTCGACCCCTCCGACGTCCGGCGCCAGAAGGGCCCCTTCGAAGACGCCTTTAAAATCCATGAGCAACGCTACTCCGATATGGTTGTGAGATGGAAGAAAGCGATGGAAACAGCTGGAGGGATTTCCGGTTGGGATTCCAGGCATTGGCAAGAATCACAGTTGATACAATCTTTAGTAAAAAAGATTTTGACAAAATTGAGTAATACACCCTTGGGTGTTGCTAAACATCCTATTGGAATCAATTCTCGTGTAGAAGAAGTTATGAGGGTGTTAGATGTGAAATCCAATGGTGTCCGAGTTGTGGGATTTCATGGGATGGGTGGAATTGGCAAGACAACCCTTGCTAAGGCTGTTTATAATAAAATTGTTGCTCAATTTGAACACCGCAGCTTCATTTCCAACATCGGAGCAGCTTGGAGACAACGTAATGGTATAATTTCCCTTCAAAACAAACTTATTCGTGATCTATTTCCAAAAAATGCATCAGTTGTTGATGAGTTTAGTAGAGGTGTCATTGTGATCAAAGAGAAAATTCATGATAAGCGAGTTCTAGTTGTTCTAGATGATGTTGATGATGTATGTCAACTTGATGCACTCGCTGGTAGAAAAGATTGGTTTTATGAGGGAAGTAGGATCATCATCACAACAAGAGATAAAAATGTTTTGTTGCAGCACTTTGTGAATGAAATATATGAGGTTAAAGAGTTGAGTCCCGATGAGTCACTTCAACTCTTTAGTTATCATGCATTTGGAAGAGAGAAACCTGTAGAAAAATTCAAGCATTTCTCTGAGAAAGTTGTGTCCTTCACTGGACGACTACCTTTGGCTCTAGAAGTAATGGGTGCTTTTCTTTTTGATAAGAGAAGAAAAGAGGAGTGGGAAGATGAATTGGTAAAGTTGAGACAGATACGTCCAGGTAATCTTCATGATGTGTTGAAAATAAGTTTTGATGGGCTAGATGAACAAGAGAAGTGTATATTCCTCGACATTGCTTGTTTCTTTGTTGAAGTGAGAATGGAGAGAGAAAGTGTAATCGATATATTGAAGGGCTGTGGTTTTAATGCTGAAATAGCAATCACAGTTCTTACGGCGAAATCTCTCATTAAGTTCATTGATAAAAATACCTTGTGGTTGCATGATCAACTTAGAGACATGGGAAGACAAATTGTTAAAGAAGAAAGCCTCGTAGATCCTGGTATGCGTAGTAGATTGTGGGAGCATGCTGAAATAATGAAAGTTTTGAAGAATGAAACGGGAACAAGATCTATTGAAGGCATCATCCTCGATTTTGGAAAGAAAGAAATTTCTAAGATCACCAATCGAAGTAGGCTCAGTGTCACCTCTATAATTACAGACTTCAAGAAAATATTTAAGCATCCTTTTGACAGTGAAGCAGAGGAAGAGGAAGAGGTGAAACTGCGCACTAAATCATTTGTGCCAATGGTTATTCTAAGACTGCTTCAAATCAATCATGGGTACCTGGAGGGAAAATTTAAACTCATACCTTCTGAGCTGAAATGGCTACGATGGAATGGATGCCCTTTGAAAGCTCTTCCTTCTGATTTTTGTCCTCGGGAACTTGCTGTCCTTGATCTTACAGAGAGCAAAATCAAACAAGTATGGGACCAAAGTTCGAGGGGTATGTGCAAGGTAAATTTCACTTATCTGACCCTTGATTGTTATGATTTTTAA 2046 0.4208 MERQEDDGDEDDYSSTSTSSPSFRFRWDVFLSFRGEDTRHNFTLRLYEELVRNGIRTFRDDDELERGEEIAPSLLTAIEDSAASIAVISENYASSRWCLEELAKILECRRLLLPVFYQVDPSDVRRQKGPFEDAFKIHEQRYSDMVVRWKKAMETAGGISGWDSRHWQESQLIQSLVKKILTKLSNTPLGVAKHPIGINSRVEEVMRVLDVKSNGVRVVGFHGMGGIGKTTLAKAVYNKIVAQFEHRSFISNIGAAWRQRNGIISLQNKLIRDLFPKNASVVDEFSRGVIVIKEKIHDKRVLVVLDDVDDVCQLDALAGRKDWFYEGSRIIITTRDKNVLLQHFVNEIYEVKELSPDESLQLFSYHAFGREKPVEKFKHFSEKVVSFTGRLPLALEVMGAFLFDKRRKEEWEDELVKLRQIRPGNLHDVLKISFDGLDEQEKCIFLDIACFFVEVRMERESVIDILKGCGFNAEIAITVLTAKSLIKFIDKNTLWLHDQLRDMGRQIVKEESLVDPGMRSRLWEHAEIMKVLKNETGTRSIEGIILDFGKKEISKITNRSRLSVTSIITDFKKIFKHPFDSEAEEEEEVKLRTKSFVPMVILRLLQINHGYLEGKFKLIPSELKWLRWNGCPLKALPSDFCPRELAVLDLTESKIKQVWDQSSRGMCKVNFTYLTLDCYDF* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00127 681 Gene3D - 183 347 IPR027417 -
Eupl06g00127 681 MobiDBLite consensus disorder prediction 1 20 - -
Eupl06g00127 681 SUPERFAMILY L domain-like 594 677 - -
Eupl06g00127 681 SUPERFAMILY "Winged helix" DNA-binding domain 426 533 IPR036390 -
Eupl06g00127 681 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 162 IPR035897 -
Eupl06g00127 681 ProSiteProfiles TIR domain profile. 25 184 IPR000157 GO:0007165
Eupl06g00127 681 Gene3D - 354 444 IPR042197 -
Eupl06g00127 681 PRINTS Disease resistance protein signature 295 309 - -
Eupl06g00127 681 PRINTS Disease resistance protein signature 218 233 - -
Eupl06g00127 681 PRINTS Disease resistance protein signature 388 402 - -
Eupl06g00127 681 Gene3D - 25 182 IPR035897 -
Eupl06g00127 681 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 668 IPR044974 GO:0006952
Eupl06g00127 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 448 IPR027417 -
Eupl06g00127 681 SMART till_3 26 159 IPR000157 GO:0007165
Eupl06g00127 681 FunFam Disease resistance protein (TIR-NBS-LRR class) 24 186 - -
Eupl06g00127 681 Pfam NB-ARC domain 200 420 IPR002182 GO:0043531
Eupl06g00127 681 Pfam TIR domain 27 188 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00127 Eupl-Chr6 2170276 2174986 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00127 196 659 WRKY Transcription Factor Family AT5G45050 32.135 1.41e-65 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00127 - - csin:114286706 791.186