Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00118 ATGAGTGACTCCGCTTACAGAGTCGAAACTACATCTCGCCTCGCTCAATGGAAGATCGAGAACTTGGGGTCTTGCACATACCGGAAATCCGATTCTTTCAAGATCGGAAACTGGAATTGGTACATATCAGTGGAGAAGAATCGGGTATTGTTTATTAAATTATACCCAGAAATATCGAATCTAACGAGAGATCACCCCCCAATTGCGTCATTTATCATTCGAGTGCTCTCTTCCGTTGGCAATCGCAAGGCTTTAGTTCATCCAGGAATAACAGACAAGCAGCTCAAGAACAACGACGACTTTATCTGGGCGATTGAGACTCCATTAACCGGGAAATTCATCATCGATGTCGAATTCCTTGATTTAAAGACTTCATCTCCCAACGGTAGTGAACCTTGCTCTATCTGGGCTGAAGGATCCACCCAGAGACAGTCAAACGCAACGGCTCTTGCATCCCTTGGCCGAATGTTATCTGAAAGCATTCACACGGATATCACAATCAATGCCTCCGATGGGAGCATTGGGGCCCACCGTGCCATCCTTGCTACACGATCACCTGTTTTTCGGAGCATGTTCTCATACAATCTCATAGAGAAGGAGTTATCAGCAATAAACATCTCCGACATGTCAATTGAAGCTTGCGAGGCTTTCCTCAACTATATATATGGCAACATCCAACATGAAGAGTTTCTGACCCACAGGCTTGCACTTCTCCATGCGGCTGATAAGTATGACATCTCTGACCTGAAAGAGGCATGCCAAGAGAGCCTTCTAGATGACATCGATACTAAGAACGTAATTGAGAGACTCCAAAATGCATCTCTCTATCAATTGCCGAAACTGAAGAGCAGTTGCATGAGGTATCTTGTGAAATTTGGTAAGATATTTGATATTCGAGATGATTTCAATGCCTTTCTGCAATGTGCAGATAGGGACCTCGTAGCTGAGATCTTCCTCGAGGTTCTTGCTGCCTGGAAAGGTTTCTGA 987 0.4458 MSDSAYRVETTSRLAQWKIENLGSCTYRKSDSFKIGNWNWYISVEKNRVLFIKLYPEISNLTRDHPPIASFIIRVLSSVGNRKALVHPGITDKQLKNNDDFIWAIETPLTGKFIIDVEFLDLKTSSPNGSEPCSIWAEGSTQRQSNATALASLGRMLSESIHTDITINASDGSIGAHRAILATRSPVFRSMFSYNLIEKELSAINISDMSIEACEAFLNYIYGNIQHEEFLTHRLALLHAADKYDISDLKEACQESLLDDIDTKNVIERLQNASLYQLPKLKSSCMRYLVKFGKIFDIRDDFNAFLQCADRDLVAEIFLEVLAAWKGF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00118 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Eupl06g00118 328 SUPERFAMILY POZ domain 148 259 IPR011333 -
Eupl06g00118 328 Pfam BTB/POZ domain 157 258 IPR000210 GO:0005515
Eupl06g00118 328 PANTHER OS08G0495500 PROTEIN-RELATED 5 327 IPR044714 -
Eupl06g00118 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Eupl06g00118 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Eupl06g00118 328 Gene3D Potassium Channel Kv1.1; Chain A 137 291 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00118 Eupl-Chr6 2034140 2039232 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Eupl06g00118 BTB 7e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00118 K10523 - vvi:100243007 571.237