Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00117 ATGGTTCAGTGGGTGTGTAAACCAATTGCAGCAAGTACTCTTGACAATATGAGAGAGCCCATAGTCAATATGTCCCTTGTCAAGGCCACCCCATTCAACTATGGAGCGGGACATGTTCAACCAAACAGTGCCATGGATCCAGGCTTGGTGTTCGACTTAACCATAATCGACTACATGAACTTTCTGTGCACCCTCGGCTATAACATGACCCAAATCGAAAATTTCATAGATGGGCCCTACACATGCCAGCAACTAGATTCTACTAGACTCATAGATCTCAACTACCCATCAATAACTGTCACTTATCTCTCCGGACTCGAACTGTTAAGAATGTCGGAACTCCAGGCACGTACGTACACTGCTCGTATCCATGAGCCTAGCGGTATCTCAGTGACAGTCGAACCGGATATACTGAAATTCGAGAATGTCGGTGAAGAGAAGACGTTCACGGTTACTCTAGAGGCAAAGAGAGGTGGTGAAGCTGATGACAACGTGTTTGGGAGGCTGATATATGGTCAGATGATTCCCGCTTTTGCTGTCAAAAAGTCTTATGTGGTGTACTTGGGAGGACATTCACATGGTCCAGAAGTTTCAACTCTCGATCTCGATCGAGTGAAGAATTCTCATTATGAGTTTTTGGGTTCTTACTTAGGAAGTAACGAGAAGGCGAAAGATGCAATTTTTTACTCATATAAAAGGCACATTAATGGTTTTGCGGCAACTCTCGAAGAAGAAGAAGCCGAAGCAATCTCAAAGCATCCGAAAGTCGTGTCGGTTTTCTTAAACAAGGGAAGGAAATTACACACAACCCGGTCGTGGAATTTTCTTGAACTAGAAAAGAATGGTATAATTCCATCGACATCGATTTGGAAGAAGGCGAGATTGGGTGAAGATACAATCATAGGAAACATTGACACTGGTGTCTGGCCAGAATCACAGAGCTTTAGTGATGAAGGAATGGGATCTATTCCATCAAGGTGGAAAGGATTCTGTCAGAATAACACCAAGGCTGGAGCTCCTTGCAATAGGAAGCTGATCGGCGCAAGATACTTCAACAAGGGCTACGCTAACATCGCGGGGCCACTCAATTCGTCCCTTGCCTCTGCGCGTGACGAAGAGGGACATGGGACCCACACCCTATCAACGGCTGGGGGTAGCTTTGTCCCTGGTGCGAATGTCTTTGGTATGGGCAATGGAACGGCGAAAGGAGGTTCGCCTAGAGCTCGAGTAGCTGCATACAAGGTATGCTGGCCGCCAATCAACGGTAGCGAGTGCTTCGATGCCGATATCTTGGCTGCATTTGATGCTGCGATACACGACGGTGTTGATATTCTTTCAGTATCACTTGGTGGGGTAGCTGCCGATTACTTCACTGATGGCATTTCGATTGGGTCGTTTCACGCCGTTAAGAAGGGGATTGTTGTAGTTGGCTCAGCCGGCAATGATGGACCAACCGATGGTTCTGTTTTGAACATTTCACCGTGGATGTTAACGGTTGGAGCAAGCACGATGGATCGGGAGTTCCCCACTTATGTTGCACTCGGCAGCAAGAAGCACTTAAAGGGACAAAGCCTTTCACCTAAATCATTGCCAGTGGAGAAGTTCTATCCACTTATTAGCAGCGTAGATGCTAAAGCAGCCAATGCATCAGCTGGGGACGCTCAGCTATGTAAGTTTGGATCGCTCGACCCTGAGAAGGTGAAGGGTAAGATTGTGGTCTGTCTTCGAGGTGAAAACGCGAGAGTCGACAAAGGTCGGGAGGCACTTATGGTTGGCGCCGTTGGTATGATTCTTGTCAATGGTGAATCCACCGGAAATGAAATTATTGCTGATGCTCATGTACTTCCTGCTTCACATATCACTTACACTGATGCTCTTGCTCTCGTCGCTTATATCAAATCTACAAAGACCCAATACAATTACACCAGAAATCCTCAAGCAAGGACCCGAGACAACGAGATGAAGCCAATGCTGAATGCGTCTTACATGAAGGCTACCCCATTCAGCTATGGAGCAGGTCATGTTTGGCCGAACCGTGCGATGGATCCCGGGTTGGTCTACGACTTAACTGTGAATGATTACTTGAATTTCCTATGCAACCTAGGCTACGACCAACGCAAAATGTCATTGTTCTCGGACGGGCCATACAAATGCCCCAAGTCATCCCGTCTAATCGATTTTAATTACCCATCAATCACTGTCCCTAATCTCTCTGGTTGGATCACCGTGACTCGAACAATTAAGAACGTTGGTTCACCTAGTACATACCATGCAGTGGTCCATGAACCAATTGGAATTGAAGTGTTTGTGAAGCCGAAGACCTTGAAATTCGAGAAGAAGGGTGAAGAGAAGAAGTTCAAGGTGACTCTGAAGACTAAGGAAGCAAATGCAGCAAGAGATTATGTATTTGGGAAGTTGACATGGACGGATGGTAAGCACACTGTGAGGAGTCCTATTGTGGTTAAGGCATCTCGTAGAGGTTAG 2484 0.4646 MVQWVCKPIAASTLDNMREPIVNMSLVKATPFNYGAGHVQPNSAMDPGLVFDLTIIDYMNFLCTLGYNMTQIENFIDGPYTCQQLDSTRLIDLNYPSITVTYLSGLELLRMSELQARTYTARIHEPSGISVTVEPDILKFENVGEEKTFTVTLEAKRGGEADDNVFGRLIYGQMIPAFAVKKSYVVYLGGHSHGPEVSTLDLDRVKNSHYEFLGSYLGSNEKAKDAIFYSYKRHINGFAATLEEEEAEAISKHPKVVSVFLNKGRKLHTTRSWNFLELEKNGIIPSTSIWKKARLGEDTIIGNIDTGVWPESQSFSDEGMGSIPSRWKGFCQNNTKAGAPCNRKLIGARYFNKGYANIAGPLNSSLASARDEEGHGTHTLSTAGGSFVPGANVFGMGNGTAKGGSPRARVAAYKVCWPPINGSECFDADILAAFDAAIHDGVDILSVSLGGVAADYFTDGISIGSFHAVKKGIVVVGSAGNDGPTDGSVLNISPWMLTVGASTMDREFPTYVALGSKKHLKGQSLSPKSLPVEKFYPLISSVDAKAANASAGDAQLCKFGSLDPEKVKGKIVVCLRGENARVDKGREALMVGAVGMILVNGESTGNEIIADAHVLPASHITYTDALALVAYIKSTKTQYNYTRNPQARTRDNEMKPMLNASYMKATPFSYGAGHVWPNRAMDPGLVYDLTVNDYLNFLCNLGYDQRKMSLFSDGPYKCPKSSRLIDFNYPSITVPNLSGWITVTRTIKNVGSPSTYHAVVHEPIGIEVFVKPKTLKFEKKGEEKKFKVTLKTKEANAARDYVFGKLTWTDGKHTVRSPIVVKASRRG* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00117 827 CDD PA_subtilisin_like 511 637 - -
Eupl06g00117 827 Gene3D - 505 651 - -
Eupl06g00117 827 Pfam Subtilase family 296 516 IPR000209 GO:0006508|GO:0008236
Eupl06g00117 827 CDD Peptidases_S8_3 266 504 IPR034197 -
Eupl06g00117 827 Gene3D Peptidase S8/S53 domain 298 657 IPR036852 GO:0004252|GO:0006508
Eupl06g00117 827 FunFam p69E protein-like 698 824 - -
Eupl06g00117 827 ProSiteProfiles Serine proteases, subtilase domain profile. 272 681 - -
Eupl06g00117 827 FunFam subtilisin-like protease SBT1.5 505 650 - -
Eupl06g00117 827 Gene3D - 698 824 - -
Eupl06g00117 827 Gene3D Peptidase S8/S53 domain 26 58 IPR036852 GO:0004252|GO:0006508
Eupl06g00117 827 Pfam Fibronectin type-III domain 726 821 IPR041469 -
Eupl06g00117 827 Pfam Fibronectin type-III domain 92 171 IPR041469 -
Eupl06g00117 827 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 222 637 IPR045051 -
Eupl06g00117 827 SUPERFAMILY Subtilisin-like 267 685 IPR036852 GO:0004252|GO:0006508
Eupl06g00117 827 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 177 268 IPR037045 -
Eupl06g00117 827 Pfam Peptidase inhibitor I9 183 268 IPR010259 -
Eupl06g00117 827 Pfam PA domain 555 628 IPR003137 -
Eupl06g00117 827 FunFam Subtilisin-like protease SBT5.3 173 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00117 Eupl-Chr6 2020216 2035036 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00117 647 822 Subtilisin-like Serine Gene Family AT2G04160 57.542 2.28e-55 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00117 - - vvi:100251507 715.687