Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00111 ATGTTCGGAAGCCTAACCCTTCCCATTGGAAGCGCAGTCCAATCCCTGCCGGGAAACAGCTTGTCTTCCATCAGAACCTCCAGGTGTTACCGTCAAATGCCTTTCAACAGCCGGAATCCCACTAAAATTAAGGTTCAAGCATTCGCCCAAACCGCTTCAAGAGTCGATGTGAGGAAACCGGCGAACCTCTACGACGTACTGCATCTCAAAGCAACCGCCTCCCCAAGCGAGATCAAAACCGCTTACCGGAGTTTGGCAAAGCGGTTTCACCCCGACGCTGCTACTTCGGAATCCGATAGTCGTGATTTCATCGAGATTCACAACGCTTACGCCACACTGTCTGATCCAACGGCTAAGGCTCTGTATGATCTCTCTATGGGCGCCGGAAGACGGCAAAGATATGCAGCCGGAAGCCGCTCTAGTTCTGTGGGTCAGACGAGACGGTGGGAAACCGACCAATGCTGGTAG 468 0.5299 MFGSLTLPIGSAVQSLPGNSLSSIRTSRCYRQMPFNSRNPTKIKVQAFAQTASRVDVRKPANLYDVLHLKATASPSEIKTAYRSLAKRFHPDAATSESDSRDFIEIHNAYATLSDPTAKALYDLSMGAGRRQRYAAGSRSSSVGQTRRWETDQCW* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00111 155 PRINTS DnaJ domain signature 98 118 IPR001623 -
Eupl06g00111 155 PRINTS DnaJ domain signature 82 97 IPR001623 -
Eupl06g00111 155 PRINTS DnaJ domain signature 64 82 IPR001623 -
Eupl06g00111 155 SMART dnaj_3 61 118 IPR001623 -
Eupl06g00111 155 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 155 - -
Eupl06g00111 155 SUPERFAMILY Chaperone J-domain 60 134 IPR036869 -
Eupl06g00111 155 CDD DnaJ 62 115 IPR001623 -
Eupl06g00111 155 ProSiteProfiles dnaJ domain profile. 62 126 IPR001623 -
Eupl06g00111 155 Gene3D DnaJ domain 47 145 IPR036869 -
Eupl06g00111 155 Pfam DnaJ domain 62 123 IPR001623 -
Eupl06g00111 155 ProSitePatterns Nt-dnaJ domain signature. 103 122 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00111 Eupl-Chr6 1958690 1959633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00111 64 123 C2H2 Transcription Factor Family AT1G74250 42.424 8.62e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00111 - - nnu:104608285 175.252