Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00101 ATGGATAACAATTTACAGATGGTTGGAGTCCACTCTCATCTTGAAATGGGATCACTAGATGAAGGATCGGCACTCGAGTTTGGGGATGAGAGCCTCGTCAGCCCTGTGGCAGTTGCTAGGGAGGCACATTCTCTGGATGCAGTGCCGCAGGGATCTTTTACAGGATCTTCGCCAGTTTGGAGTATTAAATATATGAGGAATAGAGTGTTCAGGAGCCTAAAGATTGTAGTCTTCTCTACTAAAATCAACTTACTTTTGCCTTTTGGCCCTCTAGCAATTGTAATCCATAATCTGACTGGCCATCATGGTTGGGTCTTCTTCCTAAGCTTATTGGGTATAACACCTTTGGCTGAGCGTTTGGGTTTTGCTACAGAGCAGCTAGCATGTTTCACGGGAGCTACAGTTGGGGGTCTTTTAAATGCTACTTTCGGAAATGCTACAGAATTGATAATATCAATTTATGCACTGAAAAATGGAATGATCCGCGTTGTTCAGCAGTCATTACTAGGCTCGATTTTGTCAAACATGTTGCTGGTGCTTGGATGTGCATTCTTCAGCGGTGGGATTGTCTTTTATAAGAAGGAACAGGTTTTTAACAAGGCAGCTGCTGTAGTGAATTCAGGATTGCTATTGATGGCAGTTATGAGCCTACTGTTTCCAGCTGTACTCCACTTCACACACACTGAGGTGCACTTTGGGAAGTCAGAGTTGGCCCTTTCAAGGTTTAGCAGCTGTATTATGCTTGTGGCGTATGCTGCCTATCTTGTTTTTCAGCTGAAGAGTCACAAGAATCTGTATGACCCTGTTATTGAGGGGGGACGTCAGACTGATGGGAGCTTAGATGATGATGAAGTTTCGGAGATCTCTAAATGGGAATCAATAATATGGCTTGTAATTTTGACTGCTTGGATTTCAATCATTTCAGGATACCTTGTTGACGCCATACAGGGAGCATCTGTTGCGTGGAAAATGCCAGTTGCATTCATTAGTGTTATCTTGCTTCCAATTGTTGGGAATGCTGCAGAGCATGCAAGCGCTATTATGTTTGCTATGAAAGACAAGCTTGACATTTCCCTGGGAGTTGCAATAGGGTCTTCAACACAGATATCTATGTTTGGGATTCCTTTTTGCGTGGTTGTAGGGTGGATCATGGGGCGCCCGATGGACTTAAATTTTCAACTTTTTGAGACAGCCACCCTTTTTATAACAGTTTTAGTCGTTGCCTTCTTGCTGCAGGAGGGAACATCTAACTACTTTAAAGGACTAATGCTCATTCTTTGCTATATGATAGTAGCTGCAAGTTTCTTTGTACATGTAGATCCTACTTCAGTTGGTGAGTTCCTTGTGAAAACTAACCACCCCGTGCCACTTAGACAATTTAAAGCTTAA 1389 0.4291 MDNNLQMVGVHSHLEMGSLDEGSALEFGDESLVSPVAVAREAHSLDAVPQGSFTGSSPVWSIKYMRNRVFRSLKIVVFSTKINLLLPFGPLAIVIHNLTGHHGWVFFLSLLGITPLAERLGFATEQLACFTGATVGGLLNATFGNATELIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFSGGIVFYKKEQVFNKAAAVVNSGLLLMAVMSLLFPAVLHFTHTEVHFGKSELALSRFSSCIMLVAYAAYLVFQLKSHKNLYDPVIEGGRQTDGSLDDDEVSEISKWESIIWLVILTAWISIISGYLVDAIQGASVAWKMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVVGWIMGRPMDLNFQLFETATLFITVLVVAFLLQEGTSNYFKGLMLILCYMIVAASFFVHVDPTSVGEFLVKTNHPVPLRQFKA* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00101 462 FunFam Vacuolar cation/proton exchanger 133 272 - -
Eupl06g00101 462 Pfam Sodium/calcium exchanger protein 293 433 IPR004837 GO:0016020|GO:0055085
Eupl06g00101 462 Pfam Sodium/calcium exchanger protein 104 259 IPR004837 GO:0016020|GO:0055085
Eupl06g00101 462 NCBIfam calcium/proton exchanger 85 436 IPR004798 GO:0006816|GO:0015369
Eupl06g00101 462 FunFam Vacuolar cation/proton exchanger 281 437 - -
Eupl06g00101 462 NCBIfam calcium/proton exchanger 71 436 - -
Eupl06g00101 462 Gene3D - 279 437 IPR044880 -
Eupl06g00101 462 Gene3D - 131 272 IPR044880 -
Eupl06g00101 462 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 64 441 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00101 Eupl-Chr6 1879468 1892056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00101 10 441 Antiporters AT1G55730 72.222 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00101 K07300 - ming:122067513 733.406